iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114383

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G158700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g021090	Sb10g021090.1	Sb10g021090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-06	28.6	156	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  f   ++ +++lp C H++h +C+  w         + +CPlCr
   Q: 156  CSVCLGAFqagET-VRLLPvCLHLYHVECIDPW------LEAHSTCPLCR 198
           ********66333.*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAVYLPPGFP FIPPPPPPRS LWSPPPPPTR HGQFSPAPRD NNATSPGGVI AGVVISVGAF 60
LLVLSFVCSL CQGYRNSRAN AAAAAALAAR PQAPPQPQYW DNDEHWLRRH RSDDLVDDGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCT ACTTGCCACC GGGCTTCCCC TTCATTCCTC CGCCGCCGCC GCCGCGCTCT 60
CTGTGGTCTC CGCCACCGCC CCCGACGAGG CATGGGCAGT TTTCGCCGGC GCCCAGAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g021090

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000870	Aegilops tauschii	57.47	9.00e-37	145.00
IUUC-Bdi-014489	Brachypodium distachyon	56.00	8.00e-34	135.00
IUUC-Hvu-047398	Hordeum vulgare	53.85	8.00e-34	135.00
IUUC-Ogl-077496	Oryza glaberrima	62.11	4.00e-27	113.00
IUUC-Ogu-078276	Oryza glumaepatula	61.96	2.00e-26	112.00
IUUC-Oin-080059	Oryza indica	62.11	7.00e-27	112.00
IUUC-Ome-081452	Oryza meridionalis	65.06	9.00e-26	109.00
IUUC-Osa-085670	Oryza sativa	62.11	8.00e-27	112.00
IUUC-Sit-110654	Setaria italica	66.46	1.00e-41	161.00
IUUC-Tae-124211	Triticum aestivum	79.76	2.00e-33	134.00
IUUC-Tur-126708	Triticum urartu	71.74	5.00e-33	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence