iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__4352__AT1G52730.2	fgenesh2_kg.1__4352__AT1G52730.2	fgenesh2_kg.1__4352__AT1G52730.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-27	93.7	268	300
UBD/Beta-Prp	2.80e-45	155.4	25	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH ++v+c++f ++   + +sGs Dgti++W ++
   Q: 268  GHHGPVHCVRFtPTglSY-ASGSEDGTIRIWQTT 300
           899********9553556.************875 PP

UBD/Beta-Prp

   S: 18   f..spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
              +pd+ +l+++s+d+   + + +tg+ + +++gh+++v++ ++++++   +++s D  +k+wd  tg+ +h+++ 
   Q: 25   SpiTPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE- 100
           255899999****************************************9**************************. PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlkt 168
           h++ v++++fs++++ l++G+  +++rv+d++      +  ++  g+++++++  ++  +l s+++ + vrlWd+++
   Q: 101  HKHIVRACAFSEDTKLLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDqTILSSCTDIGGVRLWDVRS 177
           *********************************99999877777777777777666637777777779********* PP
   S: 169  gkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           gk+++tl+   +++v+s +++++g+++ + ++ +tvk+wd  +
   Q: 178  GKIVQTLET--KSPVTSAEVSQDGRYITT-ADGSTVKFWDANH 217
           *******75..************977655.6789******875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEKKKVTIPQ VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET GDWIGTFEGH 60
KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE HKHIVRACAF SEDTKLLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCTGTGT CGATGTAGAA ATCCCTAAAA CTTGCTACTG TTTGCAATAC TTTGTACAAA 60
TAAAAACCAC CCAATTCCTT CGCTTTCCTC TACAAATTTC CACTTTCTTA ACTTTTCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

KEGG

aly:ARALYDRAFT_474398

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006574	Arabidopsis thaliana	99.71	0.00e+00	707.00
IUUC-Acl-008014	Aspergillus clavatus	40.12	2.00e-54	205.00
IUUC-Afu-008942	Aspergillus fumigatus	32.07	1.00e-43	169.00
IUUC-Bdi-014996	Brachypodium distachyon	81.36	3.00e-164	570.00
IUUC-Bol-016209	Brassica oleracea	92.11	0.00e+00	629.00
IUUC-Bra-016858	Brassica rapa	92.96	0.00e+00	631.00
IUUC-Gma-043984	Glycine max	82.56	4.00e-166	576.00
IUUC-Lpe-051246	Leersia perrieri	80.90	1.00e-159	554.00
IUUC-Mtr-058421	Medicago truncatula	81.55	2.00e-161	561.00
IUUC-Nfi-068553	Neosartorya fischeri	40.12	5.00e-55	207.00
IUUC-Ncr-068934	Neurospora crassa	38.97	3.00e-50	191.00
IUUC-Oba-075160	Oryza barthii	81.14	4.00e-160	556.00
IUUC-Obr-076864	Oryza brachyantha	78.82	2.00e-158	550.00
IUUC-Ogl-077076	Oryza glaberrima	81.14	2.00e-160	557.00
IUUC-Ogu-078591	Oryza glumaepatula	81.14	4.00e-160	556.00
IUUC-Oin-079631	Oryza indica	77.94	2.00e-156	544.00
IUUC-Olo-080389	Oryza longistaminata	79.12	5.00e-118	416.00
IUUC-Ome-081693	Oryza meridionalis	77.29	1.00e-154	538.00
IUUC-Oni-082190	Oryza nivara	80.54	1.00e-159	554.00
IUUC-Opu-084163	Oryza punctata	80.90	2.00e-160	557.00
IUUC-Oru-084730	Oryza rufipogon	81.14	4.00e-160	556.00
IUUC-Osa-086010	Oryza sativa	81.19	7.00e-161	558.00
IUUC-Ppa-095206	Physcomitrella patens	69.12	6.00e-134	469.00
IUUC-Pop-099172	Populus trichocarpa	83.43	2.00e-167	580.00
IUUC-Ptt-103862	Puccinia triticina	44.74	2.00e-61	228.00
IUUC-Smo-108784	Selaginella moellendorffii	68.42	3.00e-132	463.00
IUUC-Sit-110760	Setaria italica	79.88	8.00e-163	565.00
IUUC-Sbi-113932	Sorghum bicolor	81.90	1.00e-165	575.00
IUUC-Tae-123833	Triticum aestivum	79.71	6.00e-161	559.00
IUUC-Tur-126808	Triticum urartu	78.74	6.00e-138	482.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence