iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107844

Ensembl Protein ID

EEB06867

UniProt Accession

B6JZ99; B6JZ99_SCHJY

Genbank Protein ID

EEB06867.1

Protein Name

Set3 complex subunit Hif2

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01926

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01926	EEB06867	EEB06867

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-18	62.4	331	361

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H +s++++++ +   ll+++s D +ik+W++
   Q: 331  HLGSISSVEYsPYaSLLLTASADASIKLWSI 361
           999*******977789*************96 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDSEQVNYVV WRYLKESGYD NTAYAFDYET KIEQADRKWN ESCPTGALIR ALQKGLQYME 60
LEQHYATTTD DTEATQCTSS FSLVEQHVCA KKNDVSSPMD ADLDATQSIK LESDEQHVDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCAGTTCC TTTAACAGTT TAGCAAGAAC GTTACCATTC ACAATTGTCC CAATATACAA 60
AAAAAACAAG ACCACGAAGA ATCAACGATG ATTTCGTAAA ACAAAAGAAG TACAGAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001450	Ailuropoda melanoleuca	24.29	2.00e-34	138.00
IUUC-Ang-009563	Aspergillus niger	40.28	2.00e-07	49.30
IUUC-Ate-010394	Aspergillus terreus	41.67	4.00e-08	51.20
IUUC-Cho-024872	Choloepus hoffmanni	43.55	2.00e-10	58.50
IUUC-Cin-025704	Ciona intestinalis	25.05	4.00e-29	120.00
IUUC-Csv-026257	Ciona savignyi	24.56	4.00e-31	127.00
IUUC-Cgl-026703	Colletotrichum gloeosporioides	38.81	1.00e-08	52.80
IUUC-Cme-027258	Cyanidioschyzon merolae	21.93	9.00e-25	106.00
IUUC-Fox-037890	Fusarium oxysporum	34.33	4.00e-07	47.80
IUUC-Gac-041770	Gasterosteus aculeatus	25.14	2.00e-35	141.00
IUUC-Kpa-049338	Komagataella pastoris	22.91	2.00e-26	112.00
IUUC-Ncr-068945	Neurospora crassa	37.31	1.00e-07	50.10
IUUC-Oba-075618	Oryza barthii	26.95	5.00e-26	110.00
IUUC-Obr-076718	Oryza brachyantha	27.51	7.00e-28	116.00
IUUC-Ogl-077302	Oryza glaberrima	28.16	3.00e-29	121.00
IUUC-Ogu-078718	Oryza glumaepatula	28.16	3.00e-29	121.00
IUUC-Olo-080427	Oryza longistaminata	28.16	4.00e-29	120.00
IUUC-Ome-081696	Oryza meridionalis	28.48	9.00e-28	116.00
IUUC-Oni-082137	Oryza nivara	28.16	3.00e-29	121.00
IUUC-Opu-083505	Oryza punctata	26.62	1.00e-25	108.00
IUUC-Oru-085276	Oryza rufipogon	28.16	3.00e-29	120.00
IUUC-Osa-085791	Oryza sativa	28.16	3.00e-29	121.00
IUUC-Ola-087194	Oryzias latipes	23.26	9.00e-26	109.00
IUUC-Olu-087589	Ostreococcus lucimarinus	25.55	9.00e-35	139.00
IUUC-Oar-089506	Ovis aries	24.29	4.00e-35	140.00
IUUC-Ppa-095868	Physcomitrella patens	26.95	2.00e-27	115.00
IUUC-Pfo-097214	Poecilia formosa	24.81	3.00e-31	127.00
IUUC-Ppe-101572	Prunus persica	28.94	4.00e-28	117.00
IUUC-Sce-106132	Saccharomyces cerevisiae	23.53	2.00e-23	102.00
IUUC-Spo-108242	Schizosaccharomyces pombe	30.58	4.00e-69	253.00
IUUC-Sly-111717	Solanum lycopersicum	26.37	1.00e-39	155.00
IUUC-Stu-112786	Solanum tuberosum	24.71	2.00e-39	154.00
IUUC-Tru-117862	Takifugu rubripes	24.25	2.00e-32	131.00
IUUC-Tbe-127767	Tupaia belangeri	25.80	3.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence