iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058689

Ensembl Protein ID

AES63197

UniProt Accession

G7INL9; A0A0C3UVQ8; G7INL9_MEDTR

Genbank Protein ID

AES63197.2

Protein Name

Ribosome biogenesis protein BOP1 homolog

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g006020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g006020	AES63197	AES63197
MTR_2g006020	AES63198	AES63198

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-12	48.3	409	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH++ vt+++   s+  ++sGs Dgt++vW++ tg++l+
   Q: 409  GHEGAVTSISIeaSGQWMASGSSDGTVRVWEVETGRCLR 447
           8***********887889*******************97 PP

Organism

Medicago truncatula

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MKKKTVVESE MKKKKSNEKE EAPPPPSDHD DSDDDDSDDS VEVSDYDSIS EDEDSSADSI 60
DDDDSSDSDS DSKSELEDEE GASPTTHHNA SDDSDSQDEE EDVVDSEGGS ESSDLHQEGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAAAA AGACGGTGGT GGAATCTGAG ATGAAGAAGA AGAAGAGCAA TGAGAAAGAG 60
GAAGCACCAC CGCCTCCATC TGATCATGAT GATTCCGACG ACGATGACTC CGATGACAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

mtr:MTR_2g006020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	61.76	3.00e-138	484.00
IUUC-Aml-001507	Ailuropoda melanoleuca	37.66	1.00e-123	436.00
IUUC-Atr-003141	Amborella trichopoda	63.44	2.00e-153	535.00
IUUC-Apl-003545	Anas platyrhynchos	38.57	5.00e-106	377.00
IUUC-Aly-005649	Arabidopsis lyrata	64.54	0.00e+00	866.00
IUUC-Ath-007625	Arabidopsis thaliana	61.90	0.00e+00	843.00
IUUC-Ago-007958	Ashbya gossypii	37.75	7.00e-131	460.00
IUUC-Acl-008344	Aspergillus clavatus	39.59	8.00e-118	417.00
IUUC-Afl-008616	Aspergillus flavus	37.91	3.00e-122	432.00
IUUC-Afu-009083	Aspergillus fumigatus	39.33	1.00e-112	400.00
IUUC-Ani-009365	Aspergillus nidulans	38.86	3.00e-121	429.00
IUUC-Ang-009796	Aspergillus niger	37.73	2.00e-119	422.00
IUUC-Aor-010015	Aspergillus oryzae	37.91	3.00e-122	432.00
IUUC-Ate-010537	Aspergillus terreus	38.21	5.00e-126	444.00
IUUC-Ame-011767	Astyanax mexicanus	38.91	1.00e-57	215.00
IUUC-Bgr-012286	Blumeria graminis	38.87	8.00e-133	467.00
IUUC-Bta-013569	Bos taurus	42.31	1.00e-139	489.00
IUUC-Bci-013820	Botrytis cinerea	38.74	1.00e-123	436.00
IUUC-Bdi-014895	Brachypodium distachyon	61.53	0.00e+00	813.00
IUUC-Bol-016099	Brassica oleracea	65.35	0.00e+00	881.00
IUUC-Bra-017174	Brassica rapa	65.40	0.00e+00	890.00
IUUC-Cel-018201	Caenorhabditis elegans	37.59	2.00e-113	402.00
IUUC-Cja-019009	Callithrix jacchus	40.63	4.00e-83	301.00
IUUC-Cfa-020173	Canis familiaris	38.06	4.00e-126	444.00
IUUC-Cpo-021796	Cavia porcellus	41.21	1.00e-132	466.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	45.15	2.00e-156	545.00
IUUC-Csa-023440	Chlorocebus sabaeus	40.26	6.00e-141	494.00
IUUC-Cin-025782	Ciona intestinalis	39.40	3.00e-136	478.00
IUUC-Csv-026352	Ciona savignyi	41.02	4.00e-82	298.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	35.99	6.00e-102	364.00
IUUC-Cne-027004	Cryptococcus neoformans	40.69	7.00e-139	487.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.14	2.00e-98	352.00
IUUC-Dre-028658	Danio rerio	42.36	2.00e-142	499.00
IUUC-Dno-028883	Dasypus novemcinctus	41.87	2.00e-139	488.00
IUUC-Dor-031031	Dipodomys ordii	41.25	9.00e-141	493.00
IUUC-Dse-031443	Dothistroma septosporum	37.80	9.00e-122	430.00
IUUC-Dme-031786	Drosophila melanogaster	38.24	1.00e-137	483.00
IUUC-Eca-033677	Equus caballus	40.36	8.00e-139	486.00
IUUC-Eeu-035310	Erinaceus europaeus	38.25	1.00e-98	353.00
IUUC-Fca-035888	Felis catus	40.54	8.00e-134	470.00
IUUC-Fal-037438	Ficedula albicollis	41.41	3.00e-116	411.00
IUUC-Fox-037973	Fusarium oxysporum	38.30	2.00e-134	472.00
IUUC-Fso-038187	Fusarium solani	38.14	1.00e-133	469.00
IUUC-Gmo-039114	Gadus morhua	38.88	7.00e-121	427.00
IUUC-Ggr-039746	Gaeumannomyces graminis	36.86	7.00e-135	474.00
IUUC-Gga-040631	Gallus gallus	41.30	4.00e-79	287.00
IUUC-Gac-042582	Gasterosteus aculeatus	41.31	2.00e-133	468.00
IUUC-Gma-044215	Glycine max	79.63	0.00e+00	1099.00
IUUC-Ggo-045587	Gorilla gorilla	40.66	2.00e-139	488.00
IUUC-Hsa-046319	Homo sapiens	40.66	2.00e-139	489.00
IUUC-Hvu-047526	Hordeum vulgare	59.73	0.00e+00	788.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	41.55	1.00e-136	479.00
IUUC-Kpa-049221	Komagataella pastoris	36.17	7.00e-122	431.00
IUUC-Lch-049640	Latimeria chalumnae	42.43	6.00e-144	504.00
IUUC-Lpe-051135	Leersia perrieri	62.12	2.00e-138	485.00
IUUC-Loc-051930	Lepisosteus oculatus	42.58	8.00e-145	506.00
IUUC-Lma-053290	Leptosphaeria maculans	39.31	7.00e-124	437.00
IUUC-Laf-053903	Loxodonta africana	39.49	2.00e-120	426.00
IUUC-Mcc-055471	Macaca mulatta	40.11	9.00e-141	493.00
IUUC-Meu-056190	Macropus eugenii	41.27	5.00e-134	471.00
IUUC-Mor-057135	Magnaporthe oryzae	40.00	2.00e-130	459.00
IUUC-Mpo-057475	Magnaporthe poae	36.09	2.00e-126	446.00
IUUC-Mla-059149	Melampsora laricipopulina	41.19	5.00e-128	451.00
IUUC-Mga-059645	Meleagris gallopavo	35.61	8.00e-42	162.00
IUUC-Mvi-060485	Microbotryum violaceum	39.14	9.00e-119	421.00
IUUC-Mmr-061674	Microcebus murinus	41.67	3.00e-132	464.00
IUUC-Mdo-062973	Monodelphis domestica	40.66	7.00e-139	487.00
IUUC-Mmu-064180	Mus musculus	39.81	6.00e-138	484.00
IUUC-Mac-064535	Musa acuminata	60.76	6.00e-176	610.00
IUUC-Mpu-066406	Mustela putorius furo	41.27	3.00e-140	491.00
IUUC-Mlu-067795	Myotis lucifugus	42.12	1.00e-130	459.00
IUUC-Nfi-068516	Neosartorya fischeri	37.50	2.00e-106	379.00
IUUC-Ncr-068767	Neurospora crassa	39.94	3.00e-119	422.00
IUUC-Opr-071084	Ochotona princeps	41.22	3.00e-57	215.00
IUUC-Ont-071614	Oreochromis niloticus	41.59	3.00e-141	495.00
IUUC-Oba-075980	Oryza barthii	61.87	3.00e-137	481.00
IUUC-Obr-076799	Oryza brachyantha	60.70	0.00e+00	795.00
IUUC-Ogl-077134	Oryza glaberrima	60.70	0.00e+00	776.00
IUUC-Ogu-078655	Oryza glumaepatula	51.45	1.00e-175	608.00
IUUC-Oin-079654	Oryza indica	60.70	0.00e+00	775.00
IUUC-Olo-080706	Oryza longistaminata	62.63	2.00e-139	488.00
IUUC-Ome-081716	Oryza meridionalis	62.00	3.00e-139	488.00
IUUC-Oni-082508	Oryza nivara	51.06	1.00e-174	605.00
IUUC-Opu-083707	Oryza punctata	62.63	3.00e-139	488.00
IUUC-Oru-084453	Oryza rufipogon	62.63	2.00e-139	488.00
IUUC-Osa-085811	Oryza sativa	60.55	0.00e+00	775.00
IUUC-Ola-087361	Oryzias latipes	42.42	4.00e-142	498.00
IUUC-Oga-088015	Otolemur garnettii	41.49	4.00e-137	481.00
IUUC-Oar-090058	Ovis aries	49.10	7.00e-46	177.00
IUUC-Ptr-090631	Pan troglodytes	36.67	4.00e-49	187.00
IUUC-Pan-092306	Papio anubis	40.34	2.00e-140	492.00
IUUC-Pma-094622	Petromyzon marinus	40.15	2.00e-138	485.00
IUUC-Pno-094794	Phaeosphaeria nodorum	36.10	4.00e-110	391.00
IUUC-Ppa-095528	Physcomitrella patens	55.05	6.00e-143	500.00
IUUC-Pfo-096682	Poecilia formosa	42.03	8.00e-142	497.00
IUUC-Pab-097939	Pongo abelii	39.84	3.00e-128	451.00
IUUC-Pop-099043	Populus trichocarpa	69.75	0.00e+00	880.00
IUUC-Pca-100333	Procavia capensis	41.67	1.00e-138	486.00
IUUC-Ppe-102078	Prunus persica	66.76	0.00e+00	882.00
IUUC-Pgr-103525	Puccinia graminis	38.76	1.00e-116	413.00
IUUC-Ptt-103929	Puccinia triticina	38.91	1.00e-112	400.00
IUUC-Pte-104029	Pyrenophora teres	39.48	7.00e-133	467.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	39.48	9.00e-133	466.00
IUUC-Rno-105248	Rattus norvegicus	41.52	5.00e-138	484.00
IUUC-Sce-106381	Saccharomyces cerevisiae	37.43	2.00e-126	445.00
IUUC-Sha-106519	Sarcophilus harrisii	41.15	6.00e-141	493.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	37.23	2.00e-121	429.00
IUUC-Spo-108071	Schizosaccharomyces pombe	37.62	3.00e-118	419.00
IUUC-Smo-109604	Selaginella moellendorffii	58.23	0.00e+00	716.00
IUUC-Sit-110551	Setaria italica	53.78	0.00e+00	659.00
IUUC-Sly-110970	Solanum lycopersicum	65.99	9.00e-142	496.00
IUUC-Stu-112593	Solanum tuberosum	65.87	0.00e+00	917.00
IUUC-Sar-113123	Sorex araneus	37.95	8.00e-59	219.00
IUUC-Sbi-113945	Sorghum bicolor	61.49	0.00e+00	818.00
IUUC-Sre-115188	Sporisorium reilianum	37.24	4.00e-123	435.00
IUUC-Ssc-115352	Sus scrofa	41.36	9.00e-139	486.00
IUUC-Tru-117685	Takifugu rubripes	41.75	5.00e-142	497.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.43	5.00e-138	484.00
IUUC-Tca-121664	Theobroma cacao	68.46	0.00e+00	963.00
IUUC-Tre-122229	Trichoderma reesei	39.19	2.00e-118	419.00
IUUC-Tvi-122576	Trichoderma virens	38.61	2.00e-118	419.00
IUUC-Tae-124110	Triticum aestivum	60.88	0.00e+00	765.00
IUUC-Tur-126781	Triticum urartu	62.25	4.00e-135	474.00
IUUC-Tme-127080	Tuber melanosporum	42.28	6.00e-148	516.00
IUUC-Ttr-128514	Tursiops truncatus	42.35	4.00e-86	311.00
IUUC-Uma-129556	Ustilago maydis	37.71	4.00e-120	425.00
IUUC-Vda-129715	Verticillium dahliae	37.47	8.00e-129	453.00
IUUC-Vvi-131211	Vitis vinifera	71.18	0.00e+00	935.00
IUUC-Xma-133883	Xiphophorus maculatus	42.18	4.00e-136	478.00
IUUC-Yli-134438	Yarrowia lipolytica	37.70	2.00e-124	439.00
IUUC-Zma-135341	Zea mays	60.42	0.00e+00	819.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence