iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071614

Ensembl Protein ID

ENSONIP00000019295.1

UniProt Accession

I3KDV0; I3KDV0_ORENI

Genbank Protein ID

ENSONIP00000019295

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AERX01061252

Gene Name

bop1; BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000015336.1	ENSONIT00000019312.1	ENSONIP00000019295.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-13	50.6	381	419

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v++++  ++   l+sGsdDg+++ W++ + ++ k
   Q: 381  GHSGLVRSISVsPSgQWLASGSDDGSVRFWEVCSSRCMK 419
           8**********966699**************99988876 PP

Organism

Oreochromis niloticus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MKKAGEKTAL KRSKEEEEEQ NQIFNFNRKP ADEDKDDDLS DSEDSVYSGL EDSGSDAEGE 60
EGSEEEEEDD DDDKMKERTE EEVSEEKKED EYEHDSSDEE DIRNTVGNIP VEWYKDFPHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTCCTGTC ACTGTAACTA TGACGTTCTG CCAGAAGTTC AAGGCGTCAT CAGCAGGCCC 60
CGCCTTCAAC CTGTGACGCG TGACCTTTAA CCTTCGGTTT CACGTGGTTG AATCGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	40.50	3.00e-121	429.00
IUUC-Aml-001507	Ailuropoda melanoleuca	66.07	0.00e+00	827.00
IUUC-Atr-003141	Amborella trichopoda	41.86	9.00e-88	317.00
IUUC-Apl-003545	Anas platyrhynchos	64.19	0.00e+00	750.00
IUUC-Aly-005649	Arabidopsis lyrata	46.28	8.00e-159	554.00
IUUC-Ath-007625	Arabidopsis thaliana	46.69	1.00e-156	546.00
IUUC-Ago-007958	Ashbya gossypii	43.14	3.00e-161	562.00
IUUC-Acl-008344	Aspergillus clavatus	43.32	2.00e-141	496.00
IUUC-Afl-008616	Aspergillus flavus	42.73	2.00e-143	503.00
IUUC-Afu-009083	Aspergillus fumigatus	42.88	7.00e-138	484.00
IUUC-Ani-009365	Aspergillus nidulans	42.42	2.00e-143	503.00
IUUC-Ang-009796	Aspergillus niger	42.27	4.00e-139	489.00
IUUC-Aor-010015	Aspergillus oryzae	42.73	2.00e-143	503.00
IUUC-Ate-010537	Aspergillus terreus	42.64	8.00e-146	511.00
IUUC-Ame-011767	Astyanax mexicanus	72.86	2.00e-120	425.00
IUUC-Bgr-012286	Blumeria graminis	44.70	8.00e-153	534.00
IUUC-Bta-013569	Bos taurus	68.17	0.00e+00	863.00
IUUC-Bci-013820	Botrytis cinerea	42.86	3.00e-143	502.00
IUUC-Bdi-014895	Brachypodium distachyon	45.19	4.00e-155	541.00
IUUC-Bol-016099	Brassica oleracea	45.40	5.00e-157	548.00
IUUC-Bra-017174	Brassica rapa	45.40	3.00e-157	550.00
IUUC-Cel-018201	Caenorhabditis elegans	48.25	3.00e-160	558.00
IUUC-Cja-019009	Callithrix jacchus	60.39	0.00e+00	761.00
IUUC-Cfa-020173	Canis familiaris	63.75	0.00e+00	817.00
IUUC-Cpo-021796	Cavia porcellus	69.31	0.00e+00	867.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.47	3.00e-154	538.00
IUUC-Csa-023440	Chlorocebus sabaeus	69.14	0.00e+00	896.00
IUUC-Cin-025782	Ciona intestinalis	58.28	0.00e+00	775.00
IUUC-Csv-026352	Ciona savignyi	56.46	0.00e+00	756.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.56	6.00e-118	418.00
IUUC-Cne-027004	Cryptococcus neoformans	45.61	1.00e-167	583.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.35	9.00e-117	414.00
IUUC-Dre-028658	Danio rerio	75.83	0.00e+00	1002.00
IUUC-Dno-028883	Dasypus novemcinctus	69.23	0.00e+00	874.00
IUUC-Dor-031031	Dipodomys ordii	67.89	0.00e+00	895.00
IUUC-Dse-031443	Dothistroma septosporum	40.42	1.00e-144	506.00
IUUC-Dme-031786	Drosophila melanogaster	53.29	0.00e+00	710.00
IUUC-Eca-033677	Equus caballus	69.14	0.00e+00	876.00
IUUC-Eeu-035310	Erinaceus europaeus	64.88	0.00e+00	698.00
IUUC-Fca-035888	Felis catus	65.65	0.00e+00	855.00
IUUC-Fal-037438	Ficedula albicollis	62.85	0.00e+00	682.00
IUUC-Fox-037973	Fusarium oxysporum	44.03	2.00e-159	556.00
IUUC-Fso-038187	Fusarium solani	44.03	3.00e-159	555.00
IUUC-Gmo-039114	Gadus morhua	74.07	0.00e+00	934.00
IUUC-Ggr-039746	Gaeumannomyces graminis	43.83	2.00e-158	552.00
IUUC-Gga-040631	Gallus gallus	67.84	5.00e-144	503.00
IUUC-Gac-042582	Gasterosteus aculeatus	82.43	0.00e+00	1113.00
IUUC-Gma-044215	Glycine max	45.27	1.00e-146	513.00
IUUC-Ggo-045587	Gorilla gorilla	69.40	0.00e+00	899.00
IUUC-Hsa-046319	Homo sapiens	69.47	0.00e+00	899.00
IUUC-Hvu-047526	Hordeum vulgare	44.03	7.00e-145	508.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	69.14	0.00e+00	880.00
IUUC-Kpa-049221	Komagataella pastoris	42.19	1.00e-154	540.00
IUUC-Lch-049640	Latimeria chalumnae	73.29	0.00e+00	975.00
IUUC-Lpe-051135	Leersia perrieri	40.45	5.00e-131	461.00
IUUC-Loc-051930	Lepisosteus oculatus	74.68	0.00e+00	985.00
IUUC-Lma-053290	Leptosphaeria maculans	42.97	4.00e-142	498.00
IUUC-Laf-053903	Loxodonta africana	63.92	0.00e+00	775.00
IUUC-Mcc-055471	Macaca mulatta	68.98	0.00e+00	894.00
IUUC-Meu-056190	Macropus eugenii	69.68	0.00e+00	885.00
IUUC-Mor-057135	Magnaporthe oryzae	42.53	2.00e-147	516.00
IUUC-Mpo-057475	Magnaporthe poae	42.90	9.00e-148	517.00
IUUC-Mtr-058689	Medicago truncatula	41.59	3.00e-132	466.00
IUUC-Mla-059149	Melampsora laricipopulina	44.32	7.00e-164	570.00
IUUC-Mga-059645	Meleagris gallopavo	59.92	5.00e-88	317.00
IUUC-Mvi-060485	Microbotryum violaceum	43.75	3.00e-147	516.00
IUUC-Mmr-061674	Microcebus murinus	67.95	0.00e+00	874.00
IUUC-Mdo-062973	Monodelphis domestica	70.11	0.00e+00	914.00
IUUC-Mmu-064180	Mus musculus	68.66	0.00e+00	879.00
IUUC-Mac-064535	Musa acuminata	40.89	1.00e-93	338.00
IUUC-Mpu-066406	Mustela putorius furo	68.66	0.00e+00	889.00
IUUC-Mlu-067795	Myotis lucifugus	68.34	0.00e+00	844.00
IUUC-Nfi-068516	Neosartorya fischeri	42.55	1.00e-129	457.00
IUUC-Ncr-068767	Neurospora crassa	44.89	1.00e-140	494.00
IUUC-Opr-071084	Ochotona princeps	63.96	1.00e-107	383.00
IUUC-Oba-075980	Oryza barthii	41.73	4.00e-132	465.00
IUUC-Obr-076799	Oryza brachyantha	44.19	2.00e-146	513.00
IUUC-Ogl-077134	Oryza glaberrima	43.43	8.00e-142	497.00
IUUC-Ogu-078655	Oryza glumaepatula	42.26	2.00e-137	483.00
IUUC-Oin-079654	Oryza indica	43.71	1.00e-141	497.00
IUUC-Olo-080706	Oryza longistaminata	41.59	6.00e-132	464.00
IUUC-Ome-081716	Oryza meridionalis	31.85	7.00e-79	288.00
IUUC-Oni-082508	Oryza nivara	42.03	1.00e-134	473.00
IUUC-Opu-083707	Oryza punctata	41.59	8.00e-131	461.00
IUUC-Oru-084453	Oryza rufipogon	41.59	6.00e-132	464.00
IUUC-Osa-085811	Oryza sativa	43.71	8.00e-142	497.00
IUUC-Ola-087361	Oryzias latipes	87.26	0.00e+00	1153.00
IUUC-Oga-088015	Otolemur garnettii	68.98	0.00e+00	906.00
IUUC-Oar-090058	Ovis aries	73.05	5.00e-72	265.00
IUUC-Ptr-090631	Pan troglodytes	64.50	2.00e-114	405.00
IUUC-Pan-092306	Papio anubis	69.35	0.00e+00	895.00
IUUC-Pma-094622	Petromyzon marinus	67.95	0.00e+00	915.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.90	7.00e-134	471.00
IUUC-Ppa-095528	Physcomitrella patens	42.66	7.00e-99	354.00
IUUC-Pfo-096682	Poecilia formosa	88.54	0.00e+00	1187.00
IUUC-Pab-097939	Pongo abelii	68.61	0.00e+00	795.00
IUUC-Pop-099530	Populus trichocarpa	46.32	1.00e-140	493.00
IUUC-Pca-100333	Procavia capensis	68.34	0.00e+00	883.00
IUUC-Ppe-102078	Prunus persica	44.12	5.00e-147	514.00
IUUC-Pgr-103525	Puccinia graminis	44.65	7.00e-153	535.00
IUUC-Ptt-103929	Puccinia triticina	43.89	3.00e-149	523.00
IUUC-Pte-104029	Pyrenophora teres	42.97	8.00e-154	537.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	43.12	4.00e-154	538.00
IUUC-Rno-105248	Rattus norvegicus	68.66	0.00e+00	879.00
IUUC-Sce-106381	Saccharomyces cerevisiae	40.12	6.00e-154	538.00
IUUC-Sha-106519	Sarcophilus harrisii	68.79	0.00e+00	900.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	42.14	6.00e-140	491.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.11	1.00e-138	487.00
IUUC-Smo-109604	Selaginella moellendorffii	46.55	3.00e-156	545.00
IUUC-Sit-110551	Setaria italica	43.84	4.00e-145	508.00
IUUC-Sly-110970	Solanum lycopersicum	43.43	2.00e-79	290.00
IUUC-Stu-112593	Solanum tuberosum	44.50	7.00e-151	528.00
IUUC-Sar-113123	Sorex araneus	63.21	1.00e-107	382.00
IUUC-Sbi-113945	Sorghum bicolor	43.55	2.00e-148	520.00
IUUC-Sre-115188	Sporisorium reilianum	43.68	8.00e-153	534.00
IUUC-Ssc-115352	Sus scrofa	67.47	0.00e+00	874.00
IUUC-Tru-117685	Takifugu rubripes	87.38	0.00e+00	1174.00
IUUC-Tni-119982	Tetraodon nigroviridis	84.98	0.00e+00	1105.00
IUUC-Tca-121664	Theobroma cacao	45.38	1.00e-155	543.00
IUUC-Tre-122229	Trichoderma reesei	43.10	1.00e-138	486.00
IUUC-Tvi-122576	Trichoderma virens	42.88	7.00e-143	501.00
IUUC-Tae-124110	Triticum aestivum	43.34	1.00e-135	477.00
IUUC-Tur-126781	Triticum urartu	39.90	5.00e-117	415.00
IUUC-Tme-127080	Tuber melanosporum	46.93	3.00e-174	605.00
IUUC-Ttr-128514	Tursiops truncatus	65.60	3.00e-171	595.00
IUUC-Uma-129556	Ustilago maydis	41.67	2.00e-146	513.00
IUUC-Vda-129715	Verticillium dahliae	42.88	7.00e-150	524.00
IUUC-Vvi-131211	Vitis vinifera	44.81	4.00e-147	514.00
IUUC-Xma-133883	Xiphophorus maculatus	88.38	0.00e+00	1152.00
IUUC-Yli-134438	Yarrowia lipolytica	42.84	8.00e-146	511.00
IUUC-Zma-135341	Zea mays	39.73	3.00e-132	466.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence