iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115234

Ensembl Protein ID

ENSSSCP00000022060.1

UniProt Accession

I3LDC9; I3LDC9_PIG

Genbank Protein ID

ENSSSCP00000022060

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312948

Gene Name

RNF141

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000027983.1	ENSSSCT00000022900.1	ENSSSCP00000022060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-07	31.3	156	193

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++   d  l+lpC H f+++C+ kw      s ++ +CP+Cr
   Q: 156  CCICMDGRAD--LILPCTHSFCQKCIDKW------SDRHRNCPICR 193
           ******9999..55***************......**********8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGQQISDQTQ LVLNKLPEKV AKHVTLVRES GSLTYEEFLG RVAELNDVTA KVASGQEKHL 60
LFEVQPGSDS SAFWKVVVRV VCTKINKSSG IVEASRIMNL YQFIQLYKDI TSQAAGVLAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAACTGC CGGAAGCGGG ATGCCTTGAA CCTGGGGTGA GCTCCGCCTG TCGCCGCTTC 60
TTTTCCCAGC CTCTCTATCA CCCTCGGTAC AGGAGTAGAA ACATAGGCCA GGCTTTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0003677--F:DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000520	Aegilops tauschii	41.82	4.00e-09	54.70
IUUC-Aml-001667	Ailuropoda melanoleuca	95.24	5.00e-132	462.00
IUUC-Atr-002441	Amborella trichopoda	41.54	2.00e-10	58.90
IUUC-Apl-003740	Anas platyrhynchos	83.33	1.00e-115	408.00
IUUC-Aca-004541	Anolis carolinensis	81.39	2.00e-114	404.00
IUUC-Aly-006538	Arabidopsis lyrata	42.86	1.00e-08	52.80
IUUC-Ath-007086	Arabidopsis thaliana	42.86	2.00e-08	52.80
IUUC-Ame-011210	Astyanax mexicanus	74.89	7.00e-103	365.00
IUUC-Bta-012755	Bos taurus	96.97	2.00e-133	467.00
IUUC-Bdi-014630	Brachypodium distachyon	39.39	7.00e-10	57.40
IUUC-Bra-016994	Brassica rapa	41.27	4.00e-09	54.70
IUUC-Cel-018183	Caenorhabditis elegans	28.36	9.00e-17	79.70
IUUC-Cja-019484	Callithrix jacchus	95.67	1.00e-124	438.00
IUUC-Cfa-020513	Canis familiaris	96.54	1.00e-133	468.00
IUUC-Cpo-021640	Cavia porcellus	93.51	7.00e-130	455.00
IUUC-Csa-023929	Chlorocebus sabaeus	97.40	3.00e-134	469.00
IUUC-Cho-024712	Choloepus hoffmanni	93.98	2.00e-70	257.00
IUUC-Dre-027893	Danio rerio	75.32	2.00e-103	367.00
IUUC-Dno-029490	Dasypus novemcinctus	94.81	3.00e-130	456.00
IUUC-Dor-030614	Dipodomys ordii	56.74	2.00e-41	161.00
IUUC-Ete-032783	Echinops telfairi	77.78	2.00e-94	337.00
IUUC-Eca-034396	Equus caballus	96.10	1.00e-132	464.00
IUUC-Eeu-035127	Erinaceus europaeus	90.48	1.00e-124	438.00
IUUC-Fca-036513	Felis catus	90.91	4.00e-125	439.00
IUUC-Fal-037395	Ficedula albicollis	83.98	3.00e-118	416.00
IUUC-Fso-038096	Fusarium solani	35.38	3.00e-07	48.50
IUUC-Gmo-039655	Gadus morhua	72.29	4.00e-100	357.00
IUUC-Gga-040726	Gallus gallus	81.39	3.00e-106	377.00
IUUC-Gac-042012	Gasterosteus aculeatus	74.46	1.00e-103	368.00
IUUC-Gma-043685	Glycine max	40.30	1.00e-10	59.70
IUUC-Ggo-044554	Gorilla gorilla	97.40	3.00e-134	469.00
IUUC-Hsa-047009	Homo sapiens	97.40	3.00e-134	469.00
IUUC-Hvu-047703	Hordeum vulgare	39.71	6.00e-10	57.00
IUUC-Itr-047975	Ictidomys tridecemlineatus	94.81	5.00e-130	456.00
IUUC-Lch-050250	Latimeria chalumnae	77.92	6.00e-112	395.00
IUUC-Lpe-050730	Leersia perrieri	39.39	1.00e-09	56.60
IUUC-Loc-052562	Lepisosteus oculatus	79.65	2.00e-108	384.00
IUUC-Laf-053522	Loxodonta africana	92.21	2.00e-127	447.00
IUUC-Mcc-054924	Macaca mulatta	97.40	3.00e-134	469.00
IUUC-Meu-056708	Macropus eugenii	71.00	2.00e-93	334.00
IUUC-Mtr-057890	Medicago truncatula	37.33	1.00e-09	56.20
IUUC-Mga-059628	Meleagris gallopavo	80.09	1.00e-106	378.00
IUUC-Mmr-061571	Microcebus murinus	96.10	3.00e-133	466.00
IUUC-Mdo-062852	Monodelphis domestica	90.48	4.00e-126	443.00
IUUC-Mmu-063260	Mus musculus	96.54	3.00e-133	466.00
IUUC-Mac-064729	Musa acuminata	37.68	1.00e-10	59.70
IUUC-Mpu-066728	Mustela putorius furo	95.67	5.00e-132	462.00
IUUC-Mlu-068171	Myotis lucifugus	96.97	1.00e-132	464.00
IUUC-Nle-069598	Nomascus leucogenys	97.40	3.00e-134	469.00
IUUC-Opr-070440	Ochotona princeps	71.86	6.00e-88	316.00
IUUC-Ont-072220	Oreochromis niloticus	75.76	2.00e-104	370.00
IUUC-Oan-073618	Ornithorhynchus anatinus	90.48	4.00e-123	433.00
IUUC-Ocu-074638	Oryctolagus cuniculus	94.81	1.00e-131	461.00
IUUC-Oba-075867	Oryza barthii	25.00	1.00e-09	57.00
IUUC-Obr-076083	Oryza brachyantha	27.73	4.00e-09	54.70
IUUC-Ogl-077580	Oryza glaberrima	39.39	1.00e-09	56.20
IUUC-Ogu-078162	Oryza glumaepatula	25.17	9.00e-10	57.00
IUUC-Oin-079986	Oryza indica	39.39	9.00e-10	57.00
IUUC-Olo-080306	Oryza longistaminata	39.39	1.00e-09	56.20
IUUC-Ome-081802	Oryza meridionalis	37.88	3.00e-09	56.20
IUUC-Oni-082456	Oryza nivara	39.39	9.00e-10	57.00
IUUC-Opu-084086	Oryza punctata	24.50	1.00e-09	56.60
IUUC-Oru-084301	Oryza rufipogon	39.39	9.00e-10	57.00
IUUC-Osa-085956	Oryza sativa	37.88	9.00e-09	53.50
IUUC-Ola-086610	Oryzias latipes	72.10	8.00e-99	352.00
IUUC-Olu-087723	Ostreococcus lucimarinus	40.48	2.00e-06	47.00
IUUC-Oga-089014	Otolemur garnettii	94.83	2.00e-131	460.00
IUUC-Oar-089731	Ovis aries	97.84	1.00e-134	471.00
IUUC-Ptr-091461	Pan troglodytes	96.10	3.00e-132	463.00
IUUC-Pan-092822	Papio anubis	97.40	3.00e-134	469.00
IUUC-Psi-093268	Pelodiscus sinensis	80.52	4.00e-108	383.00
IUUC-Pma-094294	Petromyzon marinus	47.84	6.00e-61	226.00
IUUC-Ppa-095463	Physcomitrella patens	35.71	2.00e-09	55.50
IUUC-Pfo-097386	Poecilia formosa	74.46	2.00e-102	364.00
IUUC-Pab-098668	Pongo abelii	91.34	2.00e-122	431.00
IUUC-Pop-099490	Populus trichocarpa	40.30	3.00e-10	58.50
IUUC-Pca-100715	Procavia capensis	90.34	1.00e-72	264.00
IUUC-Ppe-101436	Prunus persica	40.00	3.00e-09	55.10
IUUC-Pva-102192	Pteropus vampyrus	95.24	6.00e-126	442.00
IUUC-Rno-105281	Rattus norvegicus	95.67	3.00e-132	463.00
IUUC-Sha-107102	Sarcophilus harrisii	89.61	2.00e-120	424.00
IUUC-Smo-109000	Selaginella moellendorffii	36.62	9.00e-10	57.00
IUUC-Sit-110346	Setaria italica	38.81	1.00e-09	56.20
IUUC-Sly-111299	Solanum lycopersicum	39.39	2.00e-09	56.20
IUUC-Stu-112196	Solanum tuberosum	39.39	4.00e-09	54.70
IUUC-Sar-113049	Sorex araneus	94.37	3.00e-130	456.00
IUUC-Sbi-114022	Sorghum bicolor	38.81	7.00e-10	57.40
IUUC-Tgu-116861	Taeniopygia guttata	83.98	3.00e-118	416.00
IUUC-Tru-118629	Takifugu rubripes	74.46	1.00e-103	368.00
IUUC-Tsy-119495	Tarsius syrichta	96.97	5.00e-134	469.00
IUUC-Tni-120480	Tetraodon nigroviridis	72.29	1.00e-100	358.00
IUUC-Tca-121345	Theobroma cacao	40.79	8.00e-11	60.50
IUUC-Tae-123511	Triticum aestivum	39.71	1.00e-09	56.60
IUUC-Tbe-128140	Tupaia belangeri	65.03	2.00e-59	221.00
IUUC-Ttr-128354	Tursiops truncatus	97.82	3.00e-133	466.00
IUUC-Vpa-130742	Vicugna pacos	96.97	9.00e-134	468.00
IUUC-Vvi-130899	Vitis vinifera	38.16	8.00e-10	57.00
IUUC-Xtr-132961	Xenopus tropicalis	78.15	4.00e-111	393.00
IUUC-Xma-133082	Xiphophorus maculatus	75.82	3.00e-79	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence