iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017137

Ensembl Protein ID

Bra023933.1-P

UniProt Accession

M4E579; M4E579_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023933	Bra023933.1	Bra023933.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-19	68.6	172	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH  +v +++f  ++  +++s++ D tik+W++
   Q: 172  GHRYEVLSVDFhpTEiYRFASCGMDTTIKIWSM 204
           8999********655999*************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKIALGNES LVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDSRFFN VFVTAGGNKI 60
TLYNCLEDGA ISALQSYSDE DKEESFYTVS WACGVKGNPF VAAGGVKGII RVIDVNNETI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAAGA TAGCTTTAGG GAACGAATCA CTTGTTGGGT CTTTGACTCC ATCGAACAAG 60
AAGTCGTACA AAGTGACCAA TAGGATTCAA GAAGGGAAGA AGCCTCTGTA TGCTGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	66.94	2.00e-153	535.00
IUUC-Aml-001510	Ailuropoda melanoleuca	39.55	6.00e-71	261.00
IUUC-Atr-002496	Amborella trichopoda	71.25	2.00e-149	521.00
IUUC-Apl-003768	Anas platyrhynchos	40.06	1.00e-73	270.00
IUUC-Aca-004382	Anolis carolinensis	40.06	5.00e-74	271.00
IUUC-Aly-005980	Arabidopsis lyrata	93.50	0.00e+00	722.00
IUUC-Ath-006579	Arabidopsis thaliana	93.50	0.00e+00	725.00
IUUC-Ame-010987	Astyanax mexicanus	40.40	2.00e-72	265.00
IUUC-Bta-013432	Bos taurus	40.06	1.00e-74	273.00
IUUC-Bci-013970	Botrytis cinerea	27.82	4.00e-22	99.40
IUUC-Bdi-014553	Brachypodium distachyon	68.68	4.00e-156	543.00
IUUC-Bol-016522	Brassica oleracea	99.46	0.00e+00	762.00
IUUC-Cel-018494	Caenorhabditis elegans	25.23	1.00e-22	100.00
IUUC-Cja-019066	Callithrix jacchus	40.06	1.00e-74	273.00
IUUC-Cfa-021261	Canis familiaris	40.06	1.00e-74	273.00
IUUC-Cpo-022375	Cavia porcellus	39.93	4.00e-63	234.00
IUUC-Csa-024005	Chlorocebus sabaeus	40.06	1.00e-74	273.00
IUUC-Cho-024881	Choloepus hoffmanni	39.57	1.00e-47	183.00
IUUC-Cin-025697	Ciona intestinalis	40.11	2.00e-76	279.00
IUUC-Csv-026221	Ciona savignyi	39.78	4.00e-76	278.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	28.27	5.00e-20	92.00
IUUC-Cne-026877	Cryptococcus neoformans	26.32	1.00e-19	91.70
IUUC-Cme-027353	Cyanidioschyzon merolae	42.36	7.00e-27	115.00
IUUC-Dre-028346	Danio rerio	40.40	9.00e-73	266.00
IUUC-Dno-029319	Dasypus novemcinctus	39.77	4.00e-74	271.00
IUUC-Dor-030746	Dipodomys ordii	30.99	4.00e-46	178.00
IUUC-Dse-031324	Dothistroma septosporum	26.48	7.00e-22	98.20
IUUC-Dme-031874	Drosophila melanogaster	38.44	9.00e-73	266.00
IUUC-Ete-032880	Echinops telfairi	35.47	8.00e-37	147.00
IUUC-Eca-034272	Equus caballus	40.06	1.00e-74	273.00
IUUC-Eeu-035303	Erinaceus europaeus	36.97	7.00e-68	251.00
IUUC-Fca-036008	Felis catus	40.06	9.00e-75	273.00
IUUC-Fal-037577	Ficedula albicollis	40.06	2.00e-73	269.00
IUUC-Fso-038294	Fusarium solani	27.61	5.00e-25	108.00
IUUC-Gmo-039008	Gadus morhua	38.66	1.00e-63	236.00
IUUC-Ggr-039894	Gaeumannomyces graminis	32.60	2.00e-18	86.70
IUUC-Gga-040859	Gallus gallus	40.06	1.00e-73	270.00
IUUC-Gac-041667	Gasterosteus aculeatus	40.77	1.00e-65	243.00
IUUC-Gma-043832	Glycine max	74.52	9.00e-172	595.00
IUUC-Ggo-045624	Gorilla gorilla	37.40	1.00e-70	259.00
IUUC-Hsa-046505	Homo sapiens	40.06	1.00e-74	273.00
IUUC-Hvu-047228	Hordeum vulgare	71.68	1.00e-73	268.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	40.06	1.00e-74	273.00
IUUC-Lch-050492	Latimeria chalumnae	39.49	1.00e-72	266.00
IUUC-Lpe-050807	Leersia perrieri	66.85	6.00e-153	533.00
IUUC-Loc-052361	Lepisosteus oculatus	40.45	6.00e-73	267.00
IUUC-Laf-053941	Loxodonta africana	40.06	2.00e-74	272.00
IUUC-Mcc-055518	Macaca mulatta	37.40	1.00e-70	259.00
IUUC-Mor-056944	Magnaporthe oryzae	24.91	6.00e-19	88.60
IUUC-Mtr-058716	Medicago truncatula	71.19	7.00e-158	549.00
IUUC-Mga-059469	Meleagris gallopavo	40.06	9.00e-74	270.00
IUUC-Mmr-061026	Microcebus murinus	37.40	2.00e-70	259.00
IUUC-Mdo-062346	Monodelphis domestica	40.34	4.00e-74	271.00
IUUC-Mmu-063785	Mus musculus	40.06	1.00e-74	273.00
IUUC-Mac-064681	Musa acuminata	70.38	2.00e-167	581.00
IUUC-Mpu-066862	Mustela putorius furo	40.06	1.00e-74	273.00
IUUC-Mlu-067103	Myotis lucifugus	39.49	6.00e-71	261.00
IUUC-Ncr-068782	Neurospora crassa	32.57	3.00e-21	96.70
IUUC-Nle-069472	Nomascus leucogenys	40.06	1.00e-74	273.00
IUUC-Opr-070376	Ochotona princeps	39.82	4.00e-43	168.00
IUUC-Ont-071513	Oreochromis niloticus	40.77	4.00e-74	271.00
IUUC-Oan-073202	Ornithorhynchus anatinus	40.06	4.00e-74	271.00
IUUC-Ocu-074012	Oryctolagus cuniculus	40.06	1.00e-74	273.00
IUUC-Oba-075030	Oryza barthii	68.32	3.00e-157	547.00
IUUC-Obr-076895	Oryza brachyantha	66.67	7.00e-155	539.00
IUUC-Ogl-077522	Oryza glaberrima	69.50	6.00e-151	526.00
IUUC-Ogu-078250	Oryza glumaepatula	63.64	4.00e-140	490.00
IUUC-Oin-079886	Oryza indica	68.04	1.00e-156	545.00
IUUC-Olo-080238	Oryza longistaminata	68.95	5.00e-154	536.00
IUUC-Ome-081204	Oryza meridionalis	63.36	2.00e-138	485.00
IUUC-Oni-082388	Oryza nivara	58.68	1.00e-128	453.00
IUUC-Opu-083537	Oryza punctata	67.48	4.00e-156	543.00
IUUC-Oru-084863	Oryza rufipogon	63.91	6.00e-141	493.00
IUUC-Osa-085622	Oryza sativa	67.77	7.00e-156	543.00
IUUC-Ola-087426	Oryzias latipes	38.95	7.00e-65	243.00
IUUC-Olu-087788	Ostreococcus lucimarinus	32.99	1.00e-53	202.00
IUUC-Oga-088228	Otolemur garnettii	40.06	1.00e-74	273.00
IUUC-Oar-090139	Ovis aries	40.06	2.00e-74	272.00
IUUC-Pan-092874	Papio anubis	41.09	1.00e-56	212.00
IUUC-Psi-093927	Pelodiscus sinensis	40.29	3.00e-74	271.00
IUUC-Pma-094740	Petromyzon marinus	38.55	3.00e-41	162.00
IUUC-Ppa-095871	Physcomitrella patens	63.96	3.00e-148	517.00
IUUC-Pfo-097208	Poecilia formosa	40.50	1.00e-73	269.00
IUUC-Pab-097658	Pongo abelii	40.06	1.00e-74	273.00
IUUC-Pop-098930	Populus trichocarpa	76.57	5.00e-179	619.00
IUUC-Ppe-101807	Prunus persica	74.59	1.00e-173	602.00
IUUC-Pva-103191	Pteropus vampyrus	33.69	4.00e-57	215.00
IUUC-Pgr-103619	Puccinia graminis	27.52	5.00e-18	85.10
IUUC-Rno-105854	Rattus norvegicus	40.06	1.00e-74	273.00
IUUC-Sha-107426	Sarcophilus harrisii	40.34	4.00e-74	271.00
IUUC-Smo-109638	Selaginella moellendorffii	66.47	2.00e-147	514.00
IUUC-Sit-110481	Setaria italica	68.13	9.00e-155	539.00
IUUC-Sly-111464	Solanum lycopersicum	74.66	3.00e-173	600.00
IUUC-Stu-112910	Solanum tuberosum	74.66	4.00e-173	600.00
IUUC-Sar-113754	Sorex araneus	37.86	9.00e-66	243.00
IUUC-Sbi-114023	Sorghum bicolor	68.96	9.00e-156	542.00
IUUC-Ssc-115386	Sus scrofa	40.06	1.00e-74	273.00
IUUC-Tgu-117123	Taeniopygia guttata	40.06	1.00e-73	270.00
IUUC-Tru-117720	Takifugu rubripes	38.61	5.00e-70	258.00
IUUC-Tsy-119584	Tarsius syrichta	37.40	1.00e-70	259.00
IUUC-Tni-119695	Tetraodon nigroviridis	40.22	7.00e-73	267.00
IUUC-Tca-121787	Theobroma cacao	75.20	6.00e-177	612.00
IUUC-Tvi-122409	Trichoderma virens	27.44	4.00e-22	99.00
IUUC-Tae-124694	Triticum aestivum	66.94	2.00e-153	535.00
IUUC-Tme-126906	Tuber melanosporum	29.14	4.00e-33	135.00
IUUC-Tbe-127557	Tupaia belangeri	38.00	9.00e-68	250.00
IUUC-Vda-129774	Verticillium dahliae	30.90	2.00e-19	90.10
IUUC-Vpa-130256	Vicugna pacos	31.83	5.00e-55	207.00
IUUC-Vvi-131201	Vitis vinifera	75.00	1.00e-175	608.00
IUUC-Xtr-132206	Xenopus tropicalis	39.77	1.00e-72	266.00
IUUC-Xma-134102	Xiphophorus maculatus	40.50	1.00e-73	270.00
IUUC-Zma-135593	Zea mays	68.96	7.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence