iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111268

Ensembl Protein ID

Solyc08g076030.2.1

UniProt Accession

K4CMX0; K4CMX0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g076030.2	Solyc08g076030.2.1	Solyc08g076030.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-21	76.3	451	488
UBD/Beta-Prp	5.90e-45	154.5	344	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgvl 35
           H+++v+++af  ++  l +v+++dD+tikvWD  +g+ 
   Q: 451  HAGGVNDIAFshPNkQLcVVTCGDDKTIKVWDAVSGRR 488
           99********99764334799***********988876 PP

UBD/Beta-Prp

   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqclee................................................... 131
           + ++v+s++f+p++  +l++G+++  i +w++ +++ l +                                                   
   Q: 344  QGSNVMSMDFHPQQqTVLLVGTNVGDISIWEVGSRERLAHksfkvwdisacsmpfqsalvkdatvsvnrcvwgpdgsilgvafskhivqiy 434
           5679999999995549999999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 132  .............tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvkl 206
                        +++   gv+ ++ +hp++  ++v++++D+t+++Wd  +g+  + ++g h+ +vys+   ++++ +++ s + dg++k 
   Q: 435  tyspagelrqhleIDAHAGGVNDIAFSHPNKqLCVVTCGDDKTIKVWDAVSGRREHMFEG-HEAPVYSVCphYKESIQFIFSTAIDGKIKA 524
           9999999999**999999999999999**9988899***********************9.********97666666************** PP
   S: 207  wdlqtgecvrtlnghtdnvksvrfspnderlvsgs..sDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           w +      + + +   + + ++ s +++rl s++  ++g   +  W+   g + +t+++ ++++  v  ++ ++n +++++++ ++++w+
   Q: 525  WLYDGMGSRVDYDAPGLWCTTMAYSADGTRLFSCGtsKEGESHLveWNESEGAIKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWE 615
           ***9666699***********************9977555555557****************999999888******************** PP
   S: 294  lkkne 298
           +++++
   Q: 616  MDNTN 620
           99876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEEQVQAGEW DEVERYLSGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDKHDR VKAVEILVKD LKVFASFNED LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCCT TGAGTAGGGA ACTGGTTTTC TTAATCCTCC AGTTTTTGGA TGAAGAGAAG 60
TTCAAAGAAA CAGTTCATAA GTAAGTTTCT CTCTATTAAC CCTTTTATCA TTTAAATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

sly:101248902

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	74.54	0.00e+00	1796.00
IUUC-Atr-003021	Amborella trichopoda	80.35	0.00e+00	1589.00
IUUC-Bdi-014941	Brachypodium distachyon	75.27	0.00e+00	1781.00
IUUC-Lpe-051683	Leersia perrieri	75.00	0.00e+00	1805.00
IUUC-Mac-064578	Musa acuminata	76.84	0.00e+00	1857.00
IUUC-Oba-075179	Oryza barthii	74.91	0.00e+00	1804.00
IUUC-Obr-076730	Oryza brachyantha	75.53	0.00e+00	1819.00
IUUC-Ogl-076958	Oryza glaberrima	75.71	0.00e+00	1840.00
IUUC-Ogu-078424	Oryza glumaepatula	74.91	0.00e+00	1804.00
IUUC-Oin-079972	Oryza indica	75.18	0.00e+00	1815.00
IUUC-Olo-080979	Oryza longistaminata	75.18	0.00e+00	1812.00
IUUC-Ome-081212	Oryza meridionalis	75.00	0.00e+00	1803.00
IUUC-Oni-082820	Oryza nivara	74.91	0.00e+00	1804.00
IUUC-Opu-083223	Oryza punctata	73.36	0.00e+00	1736.00
IUUC-Oru-084418	Oryza rufipogon	73.89	0.00e+00	1800.00
IUUC-Osa-086275	Oryza sativa	75.18	0.00e+00	1815.00
IUUC-Ppa-095845	Physcomitrella patens	69.77	0.00e+00	1583.00
IUUC-Sit-110121	Setaria italica	76.21	0.00e+00	1805.00
IUUC-Sbi-114032	Sorghum bicolor	74.60	0.00e+00	1759.00
IUUC-Tca-121774	Theobroma cacao	78.23	0.00e+00	1832.00
IUUC-Tae-125673	Triticum aestivum	74.54	0.00e+00	1796.00
IUUC-Tur-126718	Triticum urartu	73.77	0.00e+00	1768.00
IUUC-Vvi-131109	Vitis vinifera	79.40	0.00e+00	1882.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence