iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109202

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377615

Gene Name

SELMODRAFT_179038

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_179038	EFJ17125	EFJ17125

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-25	88.5	403	431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlr 31
           +v++ ++ ++ + lv++s+Dg++ +WD++
   Q: 403  GVNDARWfNSsPVLVTASGDGSVALWDVT 431
           59999**9556****************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MQSCKGSSTL KLVWDREAGL NSGCGSKDIG PRRRKWTAAF QGWWSLERRF KAPGVKLGQR 60
YFSSWMPTWS AYSSSVALAQ PAQEGLQKVL DVRFHPCGGP QIVCGCNAAP NELLIYDLIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACGAAGAC AACCATCTGT GGACAATGGA TAAAGAAGTC GTGAAACGGA GATACGAGCT 60
GTATGTGGCA GTGTTTATAT GGGCTTGGTA CTGACAACTT TGCGAAAACT TGCAGGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_179038

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000846	Aegilops tauschii	48.67	7.00e-123	434.00
IUUC-Atr-002668	Amborella trichopoda	56.77	2.00e-147	515.00
IUUC-Bdi-014501	Brachypodium distachyon	52.59	6.00e-131	461.00
IUUC-Lpe-051545	Leersia perrieri	50.88	2.00e-112	399.00
IUUC-Mac-064887	Musa acuminata	52.53	2.00e-86	311.00
IUUC-Oba-074978	Oryza barthii	46.44	2.00e-62	232.00
IUUC-Obr-076372	Oryza brachyantha	51.46	5.00e-132	464.00
IUUC-Ogl-076950	Oryza glaberrima	51.67	1.00e-132	466.00
IUUC-Ogu-078500	Oryza glumaepatula	53.20	3.00e-99	355.00
IUUC-Oin-079488	Oryza indica	46.04	4.00e-105	374.00
IUUC-Olo-080491	Oryza longistaminata	47.48	1.00e-74	273.00
IUUC-Oni-082022	Oryza nivara	53.20	3.00e-99	355.00
IUUC-Opu-083211	Oryza punctata	51.88	2.00e-133	469.00
IUUC-Oru-085018	Oryza rufipogon	53.20	1.00e-99	356.00
IUUC-Osa-085998	Oryza sativa	51.67	7.00e-133	467.00
IUUC-Ppa-095605	Physcomitrella patens	53.96	2.00e-152	531.00
IUUC-Sit-110580	Setaria italica	51.08	1.00e-120	426.00
IUUC-Sbi-114718	Sorghum bicolor	52.94	1.00e-140	493.00
IUUC-Tae-125712	Triticum aestivum	52.48	2.00e-125	442.00
IUUC-Tur-126661	Triticum urartu	45.95	5.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence