iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091145

UUCD1 version

UUC-PaT-00789

Ensembl Protein ID

ENSPTRP00000040950.4

UniProt Accession

H2R0M9; H2R0M9_PANTR

Genbank Protein ID

JAA30408.1; JAA43311.1

Protein Name

WD repeat and HMG-box DNA binding protein 1

Genbank Nucleotide ID

AACZ03094818; GABE01001428

Gene Name

WDHD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000006366.5	ENSPTRT00000045801.4	ENSPTRP00000040950.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-14	53.1	134	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtgvl 35
           gH ++v +l+f + ++ l+s+s Dg+++vW ++++++
   Q: 134  GHDAPVLSLSFdPKDIfLASASCDGSVRVWQISDQTC 170
           8**********7444447************9998887 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MPATRKPMRY GHTEGHTEVC FDDSGSFIVT CGSDGDVRIW EDLDDDDPKF INVGEKAYSC 60
ALKNGKLVTA VSNNTIQVHT FPEGVPDGIL TRFTTNANHV VFNGDGTKIA AGSSDFLVKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGTGTGGT GAGCGAGCCG AAGCGCGGGA AGCGGCTCTT GTGGATCCTC AGTGGCGGAG 60
GCTCGGTCAC CCGGGTGAGT CCCCACTCCG GCTGCCCGCG TCCACCAAGG AGATGCGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR009071--HMG_box_dom
IPR022100--Mcl1_mid
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50118--HMG_BOX_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF12341--Mcl1_mid
PF00400--WD40

SMART

SM00398--HMG
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	28.98	4.00e-73	269.00
IUUC-Aml-001369	Ailuropoda melanoleuca	88.94	0.00e+00	1954.00
IUUC-Atr-002987	Amborella trichopoda	28.61	1.00e-79	291.00
IUUC-Apl-003331	Anas platyrhynchos	69.01	0.00e+00	1517.00
IUUC-Aca-004285	Anolis carolinensis	65.33	0.00e+00	1458.00
IUUC-Aly-005907	Arabidopsis lyrata	30.02	2.00e-68	254.00
IUUC-Ath-007037	Arabidopsis thaliana	29.19	4.00e-67	249.00
IUUC-Acl-008185	Aspergillus clavatus	23.32	8.00e-54	205.00
IUUC-Afl-008630	Aspergillus flavus	22.55	2.00e-56	214.00
IUUC-Afu-008921	Aspergillus fumigatus	23.69	1.00e-55	211.00
IUUC-Ani-009243	Aspergillus nidulans	22.17	2.00e-53	204.00
IUUC-Ang-009860	Aspergillus niger	25.54	3.00e-32	133.00
IUUC-Aor-010029	Aspergillus oryzae	22.55	2.00e-56	214.00
IUUC-Ate-010570	Aspergillus terreus	25.48	5.00e-34	139.00
IUUC-Bgr-012205	Blumeria graminis	25.65	2.00e-32	134.00
IUUC-Bta-012495	Bos taurus	86.83	0.00e+00	1924.00
IUUC-Bci-013848	Botrytis cinerea	24.58	4.00e-25	110.00
IUUC-Bdi-014162	Brachypodium distachyon	27.56	3.00e-74	273.00
IUUC-Bol-015828	Brassica oleracea	27.38	7.00e-64	239.00
IUUC-Bra-016792	Brassica rapa	29.15	7.00e-61	229.00
IUUC-Cja-018995	Callithrix jacchus	94.88	0.00e+00	2118.00
IUUC-Cfa-020713	Canis familiaris	89.09	0.00e+00	1791.00
IUUC-Cpo-021596	Cavia porcellus	76.14	0.00e+00	1624.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	27.61	1.00e-19	92.40
IUUC-Csa-024080	Chlorocebus sabaeus	96.84	0.00e+00	2048.00
IUUC-Cho-024295	Choloepus hoffmanni	82.14	0.00e+00	707.00
IUUC-Cin-025123	Ciona intestinalis	48.80	4.00e-118	419.00
IUUC-Csv-025859	Ciona savignyi	47.17	2.00e-116	413.00
IUUC-Cgl-026546	Colletotrichum gloeosporioides	24.65	1.00e-27	118.00
IUUC-Cne-026873	Cryptococcus neoformans	28.83	4.00e-44	173.00
IUUC-Dre-028752	Danio rerio	57.71	0.00e+00	1220.00
IUUC-Dno-029844	Dasypus novemcinctus	80.14	0.00e+00	1717.00
IUUC-Dse-031515	Dothistroma septosporum	23.72	2.00e-55	210.00
IUUC-Dme-031614	Drosophila melanogaster	33.25	2.00e-57	217.00
IUUC-Ete-032291	Echinops telfairi	84.44	3.00e-155	542.00
IUUC-Eca-033665	Equus caballus	88.16	0.00e+00	1976.00
IUUC-Eeu-035036	Erinaceus europaeus	74.74	0.00e+00	820.00
IUUC-Fca-036209	Felis catus	88.76	0.00e+00	1959.00
IUUC-Fal-037229	Ficedula albicollis	66.93	0.00e+00	1486.00
IUUC-Fox-037686	Fusarium oxysporum	25.66	3.00e-28	119.00
IUUC-Fso-038120	Fusarium solani	26.51	1.00e-28	122.00
IUUC-Gmo-039627	Gadus morhua	60.36	1.00e-174	607.00
IUUC-Ggr-040058	Gaeumannomyces graminis	27.62	6.00e-25	109.00
IUUC-Gga-040825	Gallus gallus	69.43	0.00e+00	1503.00
IUUC-Gac-042000	Gasterosteus aculeatus	49.09	0.00e+00	978.00
IUUC-Gma-042961	Glycine max	29.95	4.00e-39	156.00
IUUC-Ggo-044531	Gorilla gorilla	98.85	0.00e+00	2215.00
IUUC-Hsa-046362	Homo sapiens	99.47	0.00e+00	2193.00
IUUC-Hvu-047719	Hordeum vulgare	28.95	2.00e-73	270.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	89.26	0.00e+00	810.00
IUUC-Lch-050106	Latimeria chalumnae	62.14	0.00e+00	1341.00
IUUC-Lpe-050996	Leersia perrieri	27.52	2.00e-71	264.00
IUUC-Loc-051766	Lepisosteus oculatus	58.76	0.00e+00	1306.00
IUUC-Lma-053144	Leptosphaeria maculans	23.13	4.00e-20	93.60
IUUC-Laf-054285	Loxodonta africana	86.37	0.00e+00	1859.00
IUUC-Mcc-054702	Macaca mulatta	97.43	0.00e+00	2114.00
IUUC-Meu-056634	Macropus eugenii	67.45	0.00e+00	684.00
IUUC-Mor-057040	Magnaporthe oryzae	23.36	1.00e-51	198.00
IUUC-Mpo-057395	Magnaporthe poae	26.67	2.00e-24	108.00
IUUC-Mtr-057830	Medicago truncatula	26.46	6.00e-72	265.00
IUUC-Mla-059152	Melampsora laricipopulina	24.12	4.00e-27	117.00
IUUC-Mga-059492	Meleagris gallopavo	69.38	0.00e+00	1529.00
IUUC-Mvi-060303	Microbotryum violaceum	27.99	2.00e-40	161.00
IUUC-Mmr-061066	Microcebus murinus	90.46	0.00e+00	2001.00
IUUC-Mdo-062039	Monodelphis domestica	74.25	0.00e+00	1616.00
IUUC-Mmu-063620	Mus musculus	83.10	0.00e+00	1830.00
IUUC-Mac-065638	Musa acuminata	27.25	3.00e-75	276.00
IUUC-Mpu-066212	Mustela putorius furo	83.66	0.00e+00	1864.00
IUUC-Mlu-068167	Myotis lucifugus	87.71	0.00e+00	1882.00
IUUC-Nfi-068338	Neosartorya fischeri	24.07	7.00e-55	208.00
IUUC-Ncr-068798	Neurospora crassa	24.92	3.00e-22	100.00
IUUC-Nle-069987	Nomascus leucogenys	97.52	0.00e+00	2143.00
IUUC-Opr-070369	Ochotona princeps	82.76	2.00e-128	453.00
IUUC-Ont-072317	Oreochromis niloticus	59.22	0.00e+00	1258.00
IUUC-Oan-073516	Ornithorhynchus anatinus	83.15	2.00e-139	487.00
IUUC-Ocu-074529	Oryctolagus cuniculus	86.84	0.00e+00	1951.00
IUUC-Oba-075044	Oryza barthii	28.02	2.00e-67	251.00
IUUC-Obr-076499	Oryza brachyantha	28.77	8.00e-65	242.00
IUUC-Ogl-077757	Oryza glaberrima	27.51	3.00e-67	250.00
IUUC-Ogu-078878	Oryza glumaepatula	28.28	5.00e-68	253.00
IUUC-Oin-079900	Oryza indica	28.77	5.00e-68	252.00
IUUC-Olo-080741	Oryza longistaminata	28.75	1.00e-67	251.00
IUUC-Ome-081734	Oryza meridionalis	28.41	9.00e-68	252.00
IUUC-Oni-082656	Oryza nivara	29.28	9.00e-68	252.00
IUUC-Opu-083312	Oryza punctata	27.30	2.00e-65	244.00
IUUC-Oru-084507	Oryza rufipogon	27.74	1.00e-67	251.00
IUUC-Osa-085329	Oryza sativa	27.36	5.00e-60	226.00
IUUC-Ola-086433	Oryzias latipes	63.75	0.00e+00	1088.00
IUUC-Olu-087690	Ostreococcus lucimarinus	27.18	2.00e-36	147.00
IUUC-Oga-088410	Otolemur garnettii	83.55	0.00e+00	1785.00
IUUC-Oar-089993	Ovis aries	86.12	0.00e+00	1895.00
IUUC-Pan-092500	Papio anubis	97.26	0.00e+00	2110.00
IUUC-Psi-093984	Pelodiscus sinensis	72.94	0.00e+00	1604.00
IUUC-Pma-094567	Petromyzon marinus	50.57	0.00e+00	675.00
IUUC-Pno-095002	Phaeosphaeria nodorum	25.00	2.00e-18	87.80
IUUC-Pfo-097387	Poecilia formosa	55.41	0.00e+00	1011.00
IUUC-Pab-097803	Pongo abelii	98.32	0.00e+00	2136.00
IUUC-Pop-099165	Populus trichocarpa	27.91	3.00e-69	256.00
IUUC-Pca-100989	Procavia capensis	68.75	4.00e-167	582.00
IUUC-Ppe-102022	Prunus persica	28.26	2.00e-70	261.00
IUUC-Pva-102389	Pteropus vampyrus	82.94	0.00e+00	1826.00
IUUC-Pgr-103635	Puccinia graminis	25.62	8.00e-32	132.00
IUUC-Ptt-103730	Puccinia triticina	27.07	1.00e-30	129.00
IUUC-Pte-104320	Pyrenophora teres	24.67	8.00e-41	162.00
IUUC-Pyt-104622	Pyrenophora triticirepentis	24.04	1.00e-37	151.00
IUUC-Rno-105689	Rattus norvegicus	81.33	0.00e+00	1802.00
IUUC-Sha-107448	Sarcophilus harrisii	75.41	0.00e+00	1597.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	25.43	3.00e-50	193.00
IUUC-Spo-108360	Schizosaccharomyces pombe	25.80	3.00e-54	206.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	23.04	1.00e-44	174.00
IUUC-Smo-109337	Selaginella moellendorffii	27.49	2.00e-66	247.00
IUUC-Sit-110790	Setaria italica	29.03	2.00e-37	151.00
IUUC-Sly-111470	Solanum lycopersicum	27.31	7.00e-69	255.00
IUUC-Stu-111945	Solanum tuberosum	26.99	6.00e-71	262.00
IUUC-Sar-113075	Sorex araneus	74.62	0.00e+00	1366.00
IUUC-Sbi-114822	Sorghum bicolor	29.33	3.00e-64	239.00
IUUC-Sre-114913	Sporisorium reilianum	23.90	1.00e-38	155.00
IUUC-Ssc-116073	Sus scrofa	85.41	0.00e+00	1671.00
IUUC-Tgu-117253	Taeniopygia guttata	73.49	0.00e+00	1261.00
IUUC-Tru-117741	Takifugu rubripes	56.75	0.00e+00	1177.00
IUUC-Tsy-118834	Tarsius syrichta	93.25	0.00e+00	764.00
IUUC-Tni-120726	Tetraodon nigroviridis	56.58	0.00e+00	1199.00
IUUC-Tca-121655	Theobroma cacao	27.34	1.00e-74	275.00
IUUC-Tre-121921	Trichoderma reesei	24.01	6.00e-28	119.00
IUUC-Tvi-122540	Trichoderma virens	23.60	2.00e-26	114.00
IUUC-Tae-123225	Triticum aestivum	28.52	3.00e-73	270.00
IUUC-Tur-126398	Triticum urartu	28.72	2.00e-71	263.00
IUUC-Tme-127075	Tuber melanosporum	24.09	2.00e-58	221.00
IUUC-Tbe-128002	Tupaia belangeri	85.67	5.00e-162	565.00
IUUC-Ttr-129101	Tursiops truncatus	83.83	0.00e+00	1784.00
IUUC-Uma-129374	Ustilago maydis	24.10	2.00e-26	114.00
IUUC-Vda-129719	Verticillium dahliae	25.08	5.00e-24	106.00
IUUC-Vpa-130039	Vicugna pacos	87.09	0.00e+00	1910.00
IUUC-Vvi-131442	Vitis vinifera	28.01	4.00e-59	223.00
IUUC-Xtr-132599	Xenopus tropicalis	63.60	0.00e+00	1417.00
IUUC-Xma-132991	Xiphophorus maculatus	58.34	0.00e+00	1229.00
IUUC-Zma-135846	Zea mays	28.33	5.00e-71	262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence