iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113934

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G332500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g036120	Sb04g036120.1	Sb04g036120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.5	70	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e++   d ++ lpC H +h+ C+  w         + +CP Cr
   Q: 70   CAVCTEEIaaADAVVRLPCAHWYHHGCIAPW------LGIRPTCPMCR 111
           *******988555999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDDGGDWITA RYLLSSILGR NPLVVDYVDE ESFPVDDPPS PSPSSPSCAR RAEPPPPPVR 60
APAGVAGTVC AVCTEEIAAA DAVVRLPCAH WYHHGCIAPW LGIRPTCPMC RAELPPSEPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG GTGGCGACTG GATCACGGCG AGGTACCTCC TCTCGTCGAT TCTTGGGCGG 60
AACCCGCTGG TGGTGGACTA CGTCGACGAG GAGTCCTTCC CCGTCGACGA CCCTCCTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g036120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051454	Leersia perrieri	72.03	9.00e-37	146.00
IUUC-Oba-075698	Oryza barthii	74.81	1.00e-40	158.00
IUUC-Obr-076061	Oryza brachyantha	72.73	9.00e-37	145.00
IUUC-Ogl-077352	Oryza glaberrima	74.81	1.00e-40	158.00
IUUC-Ogu-078455	Oryza glumaepatula	76.27	4.00e-38	149.00
IUUC-Oin-080001	Oryza indica	62.43	9.00e-40	154.00
IUUC-Oni-082170	Oryza nivara	77.12	9.00e-39	151.00
IUUC-Opu-083326	Oryza punctata	74.05	8.00e-39	151.00
IUUC-Oru-084704	Oryza rufipogon	77.12	9.00e-39	151.00
IUUC-Osa-085720	Oryza sativa	78.07	1.00e-37	147.00
IUUC-Sit-110390	Setaria italica	81.20	4.00e-37	146.00
IUUC-Tae-124245	Triticum aestivum	75.45	3.00e-36	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence