iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-105222

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger CCCH-type antiviral protein 1

Genbank Nucleotide ID

AABR07060287

Gene Name

Zc3hav1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000013948.5	ENSRNOT00000018782.5	ENSRNOP00000018782.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	24.71	1.70e+00	30.00	IUUC-Sce-106386

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MADPGVCCFI TKILCAHGGR MTLEELLGEI RLPEAQLYEL LETAGPDRFV LLETGGQAGI 60
TRSVVATTRA RVCRRKYCQR PCDSLHLCKL NLLGRCHYAQ SQRNLCKYSH DVLSEQNFQI 120

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Nucleotide Sequence
(Fasta)

GCCTCGCAGT CCGGAGCTCC GGGGACCTCA CGTCTAGCCT GGAACCGAGG GTGCCGCGGC 60
ACGGCGGACC TGCCGGCGAA AGGTTGCTTG CTTCCCATTC GCTCTCCCGC GCGGCTAACT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012317--Poly(ADP-ribose)pol_cat_dom
IPR004170--WWE-dom
IPR000571--Znf_CCCH

PROSITE

PS51059--PARP_CATALYTIC
PS50918--WWE
PS50103--ZF_C3H1

Pfam

PF00644--PARP
PF02825--WWE

Gene Ontology

GO:0005829--C:cytosol
GO:0005770--C:late endosome
GO:0005764--C:lysosome
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0003950--F:NAD+ ADP-ribosyltransferase activity
GO:0003723--F:RNA binding
GO:0071360--P:cellular response to exogenous dsRNA
GO:0045071--P:negative regulation of viral genome replication
GO:0061014--P:positive regulation of mRNA catabolic process
GO:0032481--P:positive regulation of type I interferon production
GO:0009615--P:response to virus
GO:0039507--P:suppression by virus of host molecular function

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Osa-085521	Oryza sativa	28.57	1.20e+00	28.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence