iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-044320

Ensembl Protein ID

GLYMA12G20180.1

UniProt Accession

I1LSW2; I1LSW2_SOYBN

Genbank Protein ID

KRH26200.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100800806; GLYMA_12G158800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G20180	GLYMA12G20180.1	GLYMA12G20180.1
GLYMA12G20180	GLYMA12G20180.2	GLYMA12G20180.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-09	37.9	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+++++ee ++ ++ + C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWYHPACMGMTIEEAKKLDH-FVCSECSS 188
           78.7*****************************888888887.******86 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKTRPGRKD VDSYTIRGTS KIVRAGDCVL MRPSDTSKPP YVARVEKIEQ DNRSNVKVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHYDV QSAHTIEGKC VVHSFKNYTK LENVGAEDYY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCTTAAG TAGATAACAT TAGATATCAC ATGATGAAGC AAATTAGGAA ACTGCTTAGC 60
GGAGATCTCA GGACCAAAAA ATTTACTACG AAACGGTCAA ATGTAGTGAA CCCTCCAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

gmx:100800806

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014153	Brachypodium distachyon	74.54	8.00e-98	349.00
IUUC-Oba-075188	Oryza barthii	74.53	4.00e-96	343.00
IUUC-Obr-076844	Oryza brachyantha	74.07	1.00e-98	352.00
IUUC-Ogl-077260	Oryza glaberrima	73.61	3.00e-98	350.00
IUUC-Ogu-078663	Oryza glumaepatula	77.31	1.00e-100	358.00
IUUC-Oin-079894	Oryza indica	77.78	1.00e-100	358.00
IUUC-Olo-080411	Oryza longistaminata	80.41	2.00e-97	347.00
IUUC-Ome-081623	Oryza meridionalis	76.85	1.00e-99	355.00
IUUC-Oni-082587	Oryza nivara	77.78	1.00e-100	358.00
IUUC-Oru-084597	Oryza rufipogon	77.31	4.00e-100	356.00
IUUC-Osa-086057	Oryza sativa	77.78	1.00e-100	358.00
IUUC-Olu-087802	Ostreococcus lucimarinus	44.51	6.00e-42	163.00
IUUC-Tae-122704	Triticum aestivum	76.39	5.00e-97	346.00
IUUC-Tur-126461	Triticum urartu	63.43	8.00e-77	279.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence