iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099283

UUCD1 version

UUC-PoT-01564

Ensembl Protein ID

POPTR_0001s09610.1

UniProt Accession

A9PG85; A9PG85_POPTR

Genbank Protein ID

ABK95388.1; EEE82830.1

Protein Name

Ubiquitin-conjugating enzyme E2-21 kDa 3 family protein

Genbank Nucleotide ID

EF147373; CM000337

Gene Name

POPTRDRAFT_709317; POPTR_0001s09610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s09610	POPTR_0001s09610.1	POPTR_0001s09610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.10e-32	112.9	11	141

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 8    elekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspals 97
           +l+k  ++ +++++ ++  ++e+ v++ Gp+++ Y+ggv+k+++e+p+ YP+k+P++ f++ki+hPnv+e  G+vCl++++  ++Wsp+ +
   Q: 11   DLMKLMMSDYKVEMIND-GMQEFYVEFNGPKESLYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMsGSVCLDVIN--QTWSPMFD 98
           56677788899999999.7***************************************************99********9..******** PP
   S: 98   vesvl.lsiqsllaepnpesplneeaaellkknreeykkkvre 139
           + +v+ + + +ll  pn ++pln eaa l+ +++++y+++v+e
   Q: 99   LVNVFeVFLPQLLLYPNASDPLNGEAAALMMRDHTAYDQRVKE 141
           *****889********************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPSKRREM DLMKLMMSDY KVEMINDGMQ EFYVEFNGPK ESLYQGGVWK IRVELPDAYP 60
YKSPSIGFVN KIYHPNVDEM SGSVCLDVIN QTWSPMFDLV NVFEVFLPQL LLYPNASDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCGAAACC ATTTTAGATA AAAAGATCTC TTTTCTATTC TTTCAACAAT CAGCAAGAAA 60
AAGAAAAAAA AAGGAGCAAA AATGTCTTCA CCAAGCAAAC GCAGGGAGAT GGATTTGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s09610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000745	Aegilops tauschii	88.46	5.00e-82	295.00
IUUC-Aly-005836	Arabidopsis lyrata	91.33	2.00e-81	293.00
IUUC-Ath-007613	Arabidopsis thaliana	91.95	4.00e-81	293.00
IUUC-Bdi-014713	Brachypodium distachyon	89.74	2.00e-83	300.00
IUUC-Bol-016385	Brassica oleracea	89.19	2.00e-78	283.00
IUUC-Bra-018015	Brassica rapa	89.26	5.00e-79	286.00
IUUC-Cgl-026627	Colletotrichum gloeosporioides	63.29	1.00e-58	218.00
IUUC-Cme-027171	Cyanidioschyzon merolae	71.05	2.00e-65	241.00
IUUC-Kpa-049144	Komagataella pastoris	76.74	8.00e-59	219.00
IUUC-Lpe-051335	Leersia perrieri	86.89	3.00e-84	303.00
IUUC-Lma-052971	Leptosphaeria maculans	51.96	3.00e-52	197.00
IUUC-Mvi-060244	Microbotryum violaceum	73.68	7.00e-69	252.00
IUUC-Mac-065395	Musa acuminata	86.34	5.00e-84	302.00
IUUC-Oba-075055	Oryza barthii	86.89	3.00e-84	303.00
IUUC-Obr-076538	Oryza brachyantha	86.34	6.00e-84	302.00
IUUC-Ogl-077784	Oryza glaberrima	86.89	3.00e-84	303.00
IUUC-Ogu-078045	Oryza glumaepatula	86.89	3.00e-84	303.00
IUUC-Oin-079163	Oryza indica	86.89	3.00e-84	303.00
IUUC-Olo-080847	Oryza longistaminata	66.08	3.00e-70	257.00
IUUC-Ome-081586	Oryza meridionalis	81.54	3.00e-82	296.00
IUUC-Oni-082913	Oryza nivara	86.89	3.00e-84	303.00
IUUC-Opu-083651	Oryza punctata	86.89	3.00e-84	303.00
IUUC-Oru-084980	Oryza rufipogon	86.89	3.00e-84	303.00
IUUC-Osa-085334	Oryza sativa	92.14	1.00e-75	274.00
IUUC-Ppa-095962	Physcomitrella patens	80.33	5.00e-81	292.00
IUUC-Ptt-104010	Puccinia triticina	71.43	3.00e-56	210.00
IUUC-Spo-108105	Schizosaccharomyces pombe	68.87	1.00e-64	238.00
IUUC-Smo-108956	Selaginella moellendorffii	79.23	5.00e-86	309.00
IUUC-Sit-110211	Setaria italica	85.25	3.00e-84	304.00
IUUC-Sly-111921	Solanum lycopersicum	89.62	2.00e-85	306.00
IUUC-Stu-112525	Solanum tuberosum	90.71	4.00e-86	309.00
IUUC-Tae-124413	Triticum aestivum	90.38	3.00e-84	303.00
IUUC-Tur-126414	Triticum urartu	88.46	7.00e-82	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence