iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ani-009465

Ensembl Protein ID

CADANIAP00000249

UniProt Accession

C8VD17; C8VD17_EMENI

Genbank Protein ID

CBF78870.1

Protein Name

Ribosome biogenesis protein (Rrb1), putative (AFU_orthologue AFUA_6G10320)

Genbank Nucleotide ID

BN001304

Gene Name

ANIA_07205

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADANIAG00000249	CADANIAT00000249	CADANIAP00000249

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-24	82.8	301	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH++sv  l++  ++ + ++s+s Dgt+kvWD+r+
   Q: 301  GHASSVEELQWspNEkNVFASASSDGTVKVWDVRS 335
           8***********666999**************986 PP

Organism

Aspergillus nidulans

Protein Sequence
(Fasta)

MSKRSADASE DAAALKAGER PLADAPPDDM GEFEDEFEDE FESEDEILEA GVDGRPDAER 60
EEEEKADAME VDQQTFIPGR TKLAPGEVLS PDPSTYDMLH TLSTPWPCLS FDIVRDTLGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGTGCTGC ACGACTGGCT CGTTGCCGCT TATCTGGACA GACATATTGT GAAAATGTCA 60
AAAAGAAGTG CTGACGCCTC CGAGGACGCC GCCGCCCTCA AGGCCGGTGA GCGCCCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	37.00	5.00e-66	243.00
IUUC-Aml-002309	Ailuropoda melanoleuca	42.00	1.00e-79	288.00
IUUC-Atr-002461	Amborella trichopoda	40.14	4.00e-79	286.00
IUUC-Aca-004760	Anolis carolinensis	39.34	3.00e-75	274.00
IUUC-Aly-005405	Arabidopsis lyrata	37.95	1.00e-70	258.00
IUUC-Ath-007178	Arabidopsis thaliana	38.72	6.00e-71	259.00
IUUC-Ago-007735	Ashbya gossypii	43.24	6.00e-103	366.00
IUUC-Acl-008294	Aspergillus clavatus	87.32	0.00e+00	794.00
IUUC-Afl-008486	Aspergillus flavus	88.08	0.00e+00	795.00
IUUC-Afu-009019	Aspergillus fumigatus	86.92	0.00e+00	791.00
IUUC-Ang-009641	Aspergillus niger	86.29	0.00e+00	780.00
IUUC-Ate-010426	Aspergillus terreus	88.33	0.00e+00	804.00
IUUC-Ame-010856	Astyanax mexicanus	38.07	7.00e-75	272.00
IUUC-Bgr-012258	Blumeria graminis	66.60	4.00e-162	562.00
IUUC-Bta-012437	Bos taurus	40.97	1.00e-78	285.00
IUUC-Bci-013647	Botrytis cinerea	68.56	8.00e-175	604.00
IUUC-Bdi-014728	Brachypodium distachyon	38.51	1.00e-75	275.00
IUUC-Bol-015601	Brassica oleracea	38.50	3.00e-71	260.00
IUUC-Bra-017677	Brassica rapa	45.69	6.00e-40	155.00
IUUC-Cel-018454	Caenorhabditis elegans	35.62	1.00e-71	261.00
IUUC-Cja-018859	Callithrix jacchus	39.96	4.00e-78	283.00
IUUC-Cfa-020912	Canis familiaris	40.92	3.00e-79	287.00
IUUC-Cpo-021368	Cavia porcellus	41.52	5.00e-79	286.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	27.95	1.00e-38	152.00
IUUC-Csa-023599	Chlorocebus sabaeus	41.51	6.00e-78	282.00
IUUC-Cin-025718	Ciona intestinalis	40.33	3.00e-78	283.00
IUUC-Csv-025806	Ciona savignyi	40.45	5.00e-58	216.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	63.62	1.00e-148	517.00
IUUC-Cne-026781	Cryptococcus neoformans	43.67	5.00e-85	306.00
IUUC-Cme-027129	Cyanidioschyzon merolae	31.14	7.00e-39	153.00
IUUC-Dre-028225	Danio rerio	37.50	2.00e-73	267.00
IUUC-Dno-029792	Dasypus novemcinctus	40.22	4.00e-73	266.00
IUUC-Dor-030773	Dipodomys ordii	37.56	6.00e-27	113.00
IUUC-Dse-031289	Dothistroma septosporum	67.63	4.00e-169	585.00
IUUC-Dme-031676	Drosophila melanogaster	37.23	6.00e-74	269.00
IUUC-Eca-033618	Equus caballus	41.06	4.00e-76	276.00
IUUC-Fca-036102	Felis catus	40.09	5.00e-75	273.00
IUUC-Fox-037899	Fusarium oxysporum	68.05	9.00e-180	621.00
IUUC-Fso-038130	Fusarium solani	68.67	0.00e+00	632.00
IUUC-Gmo-038741	Gadus morhua	39.63	2.00e-74	271.00
IUUC-Ggr-040086	Gaeumannomyces graminis	68.02	2.00e-176	609.00
IUUC-Gac-042243	Gasterosteus aculeatus	38.98	4.00e-77	280.00
IUUC-Gma-044177	Glycine max	40.18	1.00e-75	275.00
IUUC-Ggo-044564	Gorilla gorilla	40.18	1.00e-77	281.00
IUUC-Hsa-046021	Homo sapiens	40.31	2.00e-77	281.00
IUUC-Hvu-047721	Hordeum vulgare	36.85	9.00e-70	255.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	40.85	3.00e-77	280.00
IUUC-Kpa-049271	Komagataella pastoris	47.07	4.00e-110	389.00
IUUC-Lch-049974	Latimeria chalumnae	37.98	2.00e-75	274.00
IUUC-Lpe-051388	Leersia perrieri	35.47	9.00e-65	239.00
IUUC-Lma-053010	Leptosphaeria maculans	64.37	2.00e-171	593.00
IUUC-Laf-054058	Loxodonta africana	41.21	7.00e-80	289.00
IUUC-Mcc-055246	Macaca mulatta	41.51	6.00e-78	282.00
IUUC-Meu-056795	Macropus eugenii	36.96	2.00e-71	260.00
IUUC-Mor-057175	Magnaporthe oryzae	65.99	1.00e-174	604.00
IUUC-Mpo-057388	Magnaporthe poae	63.49	7.00e-154	535.00
IUUC-Mtr-057752	Medicago truncatula	37.64	1.00e-72	265.00
IUUC-Mla-058904	Melampsora laricipopulina	42.50	7.00e-83	299.00
IUUC-Mvi-060525	Microbotryum violaceum	42.76	8.00e-80	289.00
IUUC-Mmr-060905	Microcebus murinus	42.89	2.00e-79	288.00
IUUC-Mmu-063428	Mus musculus	40.76	9.00e-79	285.00
IUUC-Mac-065276	Musa acuminata	39.46	2.00e-73	268.00
IUUC-Mpu-066062	Mustela putorius furo	42.22	7.00e-79	285.00
IUUC-Mlu-068115	Myotis lucifugus	47.37	8.00e-55	204.00
IUUC-Nfi-068512	Neosartorya fischeri	86.72	0.00e+00	771.00
IUUC-Ncr-068629	Neurospora crassa	67.47	0.00e+00	627.00
IUUC-Nle-070016	Nomascus leucogenys	41.16	7.00e-80	289.00
IUUC-Ont-072230	Oreochromis niloticus	38.75	1.00e-74	271.00
IUUC-Oan-072759	Ornithorhynchus anatinus	30.02	5.00e-47	179.00
IUUC-Ocu-074511	Oryctolagus cuniculus	39.65	2.00e-73	267.00
IUUC-Oba-075093	Oryza barthii	35.37	3.00e-63	233.00
IUUC-Obr-076130	Oryza brachyantha	37.27	2.00e-71	261.00
IUUC-Ogl-077397	Oryza glaberrima	37.19	5.00e-72	263.00
IUUC-Ogu-078111	Oryza glumaepatula	36.07	1.00e-61	230.00
IUUC-Oin-079162	Oryza indica	35.83	2.00e-65	241.00
IUUC-Olo-080909	Oryza longistaminata	29.46	2.00e-45	175.00
IUUC-Ome-081768	Oryza meridionalis	36.13	4.00e-63	234.00
IUUC-Oni-082453	Oryza nivara	35.60	1.00e-64	239.00
IUUC-Opu-084133	Oryza punctata	35.77	2.00e-59	221.00
IUUC-Oru-085056	Oryza rufipogon	35.12	1.00e-52	198.00
IUUC-Osa-085735	Oryza sativa	37.19	4.00e-72	263.00
IUUC-Ola-087066	Oryzias latipes	40.14	3.00e-72	263.00
IUUC-Olu-087594	Ostreococcus lucimarinus	36.40	4.00e-70	256.00
IUUC-Oga-087974	Otolemur garnettii	41.55	1.00e-77	281.00
IUUC-Oar-089902	Ovis aries	41.14	1.00e-77	281.00
IUUC-Ptr-090469	Pan troglodytes	38.94	2.00e-75	274.00
IUUC-Pan-092858	Papio anubis	40.98	6.00e-78	282.00
IUUC-Psi-094092	Pelodiscus sinensis	35.08	2.00e-35	140.00
IUUC-Pno-094919	Phaeosphaeria nodorum	65.82	3.00e-157	546.00
IUUC-Ppa-095849	Physcomitrella patens	36.40	1.00e-71	262.00
IUUC-Pfo-096535	Poecilia formosa	39.67	5.00e-75	273.00
IUUC-Pab-098478	Pongo abelii	40.53	4.00e-78	283.00
IUUC-Pop-098902	Populus trichocarpa	38.83	2.00e-75	274.00
IUUC-Pca-100403	Procavia capensis	47.83	3.00e-61	226.00
IUUC-Ppe-101997	Prunus persica	40.27	2.00e-78	284.00
IUUC-Pva-102423	Pteropus vampyrus	40.81	3.00e-79	287.00
IUUC-Pgr-103339	Puccinia graminis	39.01	4.00e-78	283.00
IUUC-Ptt-103937	Puccinia triticina	39.73	3.00e-78	284.00
IUUC-Pte-104051	Pyrenophora teres	65.38	6.00e-162	561.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	66.80	3.00e-164	569.00
IUUC-Rno-106118	Rattus norvegicus	40.87	5.00e-75	273.00
IUUC-Sce-106330	Saccharomyces cerevisiae	43.81	9.00e-105	372.00
IUUC-Sha-106564	Sarcophilus harrisii	39.75	9.00e-59	218.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	44.96	9.00e-103	365.00
IUUC-Spo-108351	Schizosaccharomyces pombe	46.94	4.00e-105	373.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	70.77	2.00e-176	609.00
IUUC-Smo-109619	Selaginella moellendorffii	37.85	3.00e-74	270.00
IUUC-Sit-109857	Setaria italica	37.27	1.00e-68	251.00
IUUC-Sly-111245	Solanum lycopersicum	35.97	3.00e-65	240.00
IUUC-Stu-112645	Solanum tuberosum	37.36	3.00e-70	257.00
IUUC-Sar-113342	Sorex araneus	40.53	2.00e-72	264.00
IUUC-Sbi-114359	Sorghum bicolor	36.82	5.00e-69	253.00
IUUC-Sre-115098	Sporisorium reilianum	45.67	6.00e-89	319.00
IUUC-Ssc-115496	Sus scrofa	41.81	1.00e-77	281.00
IUUC-Tru-117662	Takifugu rubripes	38.69	1.00e-73	268.00
IUUC-Tni-120564	Tetraodon nigroviridis	36.80	5.00e-60	223.00
IUUC-Tca-121710	Theobroma cacao	38.91	2.00e-78	284.00
IUUC-Tre-122239	Trichoderma reesei	68.12	1.00e-172	597.00
IUUC-Tvi-122589	Trichoderma virens	68.19	2.00e-172	596.00
IUUC-Tae-125574	Triticum aestivum	38.65	2.00e-75	274.00
IUUC-Tur-126135	Triticum urartu	38.77	5.00e-56	210.00
IUUC-Tme-127073	Tuber melanosporum	51.40	9.00e-121	425.00
IUUC-Ttr-128383	Tursiops truncatus	41.06	4.00e-76	276.00
IUUC-Uma-129345	Ustilago maydis	45.38	1.00e-95	342.00
IUUC-Vda-129893	Verticillium dahliae	65.93	1.00e-175	607.00
IUUC-Vvi-131067	Vitis vinifera	40.32	2.00e-79	288.00
IUUC-Xtr-132603	Xenopus tropicalis	40.05	1.00e-77	282.00
IUUC-Xma-133149	Xiphophorus maculatus	39.91	1.00e-76	278.00
IUUC-Yli-134459	Yarrowia lipolytica	47.30	5.00e-112	396.00
IUUC-Zma-135548	Zea mays	37.50	3.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence