iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107969

Ensembl Protein ID

EEB06083

UniProt Accession

B6JZT3; B6JZT3_SCHJY

Genbank Protein ID

EEB06083.1

Protein Name

WD repeat protein Rrb1

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01122

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01122	EEB06083	EEB06083

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-20	68.8	288	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH++sv ++++  ++ t ++s+s Dgt ++WD+r
   Q: 288  GHASSVEDIQWspTErTVFASCSSDGTFRIWDIR 321
           8***********655999**************87 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSKRAVEEDY ETSRKNGPSA NHSSEDAVDA DMGEFEDAWD DEVESEEEEY MEADGADEEE 60
HGQEDIIPEE QQEVWLPGGE IKENENLVVD QSAYEMLHNI QVRWPFLSID VIPDEFGEER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTACACCA AGAGAGAAGG TCACAGACCT TTTCCATACA CAAAATCCGT CTCCGGCCTT 60
TCGGCTTGCA TTGGTCAATT TAGCGATGTC GAAACGTGCA GTAGAGGAGG ATTATGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	37.01	9.00e-69	252.00
IUUC-Aml-002309	Ailuropoda melanoleuca	38.98	2.00e-83	300.00
IUUC-Atr-002461	Amborella trichopoda	40.93	6.00e-83	299.00
IUUC-Aca-004760	Anolis carolinensis	39.85	4.00e-81	293.00
IUUC-Aly-005405	Arabidopsis lyrata	39.18	7.00e-79	285.00
IUUC-Ath-007178	Arabidopsis thaliana	39.73	3.00e-79	286.00
IUUC-Ago-007735	Ashbya gossypii	46.06	3.00e-100	356.00
IUUC-Acl-008294	Aspergillus clavatus	45.24	6.00e-104	369.00
IUUC-Afl-008486	Aspergillus flavus	43.95	2.00e-102	363.00
IUUC-Afu-009019	Aspergillus fumigatus	43.85	4.00e-102	362.00
IUUC-Ani-009465	Aspergillus nidulans	45.05	2.00e-102	364.00
IUUC-Ang-009641	Aspergillus niger	43.57	5.00e-101	359.00
IUUC-Ate-010426	Aspergillus terreus	44.32	2.00e-103	367.00
IUUC-Ame-010856	Astyanax mexicanus	41.03	6.00e-83	298.00
IUUC-Bgr-012258	Blumeria graminis	44.85	9.00e-89	318.00
IUUC-Bta-012437	Bos taurus	40.57	3.00e-85	306.00
IUUC-Bci-013647	Botrytis cinerea	43.26	6.00e-99	352.00
IUUC-Bdi-014728	Brachypodium distachyon	39.54	4.00e-79	286.00
IUUC-Bol-015126	Brassica oleracea	38.78	5.00e-79	286.00
IUUC-Bra-016700	Brassica rapa	46.53	3.00e-47	180.00
IUUC-Cel-018454	Caenorhabditis elegans	35.66	2.00e-76	277.00
IUUC-Cja-018859	Callithrix jacchus	40.52	1.00e-85	307.00
IUUC-Cfa-020912	Canis familiaris	40.62	3.00e-85	306.00
IUUC-Cpo-021368	Cavia porcellus	40.23	2.00e-86	310.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	42.08	9.00e-41	159.00
IUUC-Csa-023599	Chlorocebus sabaeus	40.14	2.00e-85	307.00
IUUC-Cin-025718	Ciona intestinalis	42.34	5.00e-89	319.00
IUUC-Csv-025806	Ciona savignyi	45.07	3.00e-69	253.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	40.96	1.00e-79	288.00
IUUC-Cne-026781	Cryptococcus neoformans	44.92	3.00e-95	340.00
IUUC-Cme-027129	Cyanidioschyzon merolae	35.48	1.00e-41	162.00
IUUC-Dre-028225	Danio rerio	41.61	1.00e-83	301.00
IUUC-Dno-029792	Dasypus novemcinctus	39.91	4.00e-80	289.00
IUUC-Dor-030773	Dipodomys ordii	53.85	2.00e-31	127.00
IUUC-Dse-031289	Dothistroma septosporum	44.68	3.00e-96	343.00
IUUC-Dme-031676	Drosophila melanogaster	41.23	2.00e-91	327.00
IUUC-Ete-033042	Echinops telfairi	53.85	4.00e-23	100.00
IUUC-Eca-033618	Equus caballus	39.57	1.00e-82	298.00
IUUC-Fca-036102	Felis catus	39.81	3.00e-83	300.00
IUUC-Fox-037899	Fusarium oxysporum	45.48	6.00e-104	369.00
IUUC-Fso-038130	Fusarium solani	45.16	2.00e-104	370.00
IUUC-Gmo-038741	Gadus morhua	42.24	1.00e-81	295.00
IUUC-Ggr-040086	Gaeumannomyces graminis	45.13	5.00e-95	339.00
IUUC-Gac-042243	Gasterosteus aculeatus	42.76	1.00e-84	304.00
IUUC-Gma-044177	Glycine max	39.68	5.00e-81	292.00
IUUC-Ggo-044564	Gorilla gorilla	39.86	2.00e-85	307.00
IUUC-Hsa-046021	Homo sapiens	39.77	2.00e-85	307.00
IUUC-Hvu-047721	Hordeum vulgare	37.41	3.00e-74	270.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	40.86	2.00e-85	307.00
IUUC-Kpa-049271	Komagataella pastoris	45.05	3.00e-98	350.00
IUUC-Lch-049974	Latimeria chalumnae	38.71	5.00e-80	289.00
IUUC-Lpe-051388	Leersia perrieri	35.90	3.00e-66	243.00
IUUC-Lma-053010	Leptosphaeria maculans	45.41	2.00e-99	354.00
IUUC-Laf-054058	Loxodonta africana	40.52	3.00e-85	306.00
IUUC-Mcc-055246	Macaca mulatta	40.70	2.00e-87	314.00
IUUC-Meu-056795	Macropus eugenii	42.08	5.00e-79	285.00
IUUC-Mor-057175	Magnaporthe oryzae	46.30	2.00e-98	350.00
IUUC-Mpo-057388	Magnaporthe poae	40.48	4.00e-77	280.00
IUUC-Mtr-057752	Medicago truncatula	40.00	4.00e-78	283.00
IUUC-Mla-058904	Melampsora laricipopulina	45.50	3.00e-95	340.00
IUUC-Mvi-060525	Microbotryum violaceum	46.14	6.00e-95	339.00
IUUC-Mmr-060905	Microcebus murinus	40.00	6.00e-85	305.00
IUUC-Mmu-063428	Mus musculus	41.31	5.00e-86	309.00
IUUC-Mac-065276	Musa acuminata	38.19	9.00e-76	275.00
IUUC-Mpu-066062	Mustela putorius furo	40.14	3.00e-84	303.00
IUUC-Mlu-068115	Myotis lucifugus	50.00	3.00e-59	219.00
IUUC-Nfi-068512	Neosartorya fischeri	43.85	9.00e-99	352.00
IUUC-Ncr-068629	Neurospora crassa	44.77	7.00e-101	358.00
IUUC-Nle-070016	Nomascus leucogenys	39.22	8.00e-84	301.00
IUUC-Ont-072230	Oreochromis niloticus	42.28	2.00e-82	297.00
IUUC-Oan-072759	Ornithorhynchus anatinus	32.51	1.00e-53	201.00
IUUC-Ocu-074511	Oryctolagus cuniculus	40.14	5.00e-81	292.00
IUUC-Oba-075093	Oryza barthii	36.16	1.00e-66	244.00
IUUC-Obr-076130	Oryza brachyantha	37.61	5.00e-74	269.00
IUUC-Ogl-077397	Oryza glaberrima	37.99	5.00e-76	276.00
IUUC-Ogu-078111	Oryza glumaepatula	36.36	1.00e-61	230.00
IUUC-Oin-079162	Oryza indica	36.38	8.00e-69	252.00
IUUC-Olo-080909	Oryza longistaminata	40.82	4.00e-44	170.00
IUUC-Ome-081768	Oryza meridionalis	36.43	9.00e-65	239.00
IUUC-Oni-082453	Oryza nivara	37.35	7.00e-67	246.00
IUUC-Opu-084133	Oryza punctata	35.24	4.00e-57	214.00
IUUC-Oru-085056	Oryza rufipogon	34.14	2.00e-50	190.00
IUUC-Osa-085735	Oryza sativa	38.22	4.00e-76	276.00
IUUC-Ola-087066	Oryzias latipes	43.10	6.00e-82	295.00
IUUC-Olu-087594	Ostreococcus lucimarinus	40.42	3.00e-77	280.00
IUUC-Oga-087974	Otolemur garnettii	40.14	2.00e-83	300.00
IUUC-Oar-089902	Ovis aries	40.33	3.00e-85	306.00
IUUC-Ptr-090469	Pan troglodytes	38.92	5.00e-83	299.00
IUUC-Pan-092858	Papio anubis	40.23	2.00e-85	307.00
IUUC-Psi-094092	Pelodiscus sinensis	37.11	3.00e-42	163.00
IUUC-Pno-094919	Phaeosphaeria nodorum	44.53	4.00e-93	333.00
IUUC-Ppa-095849	Physcomitrella patens	38.29	8.00e-85	305.00
IUUC-Pfo-096535	Poecilia formosa	43.65	3.00e-84	303.00
IUUC-Pab-098478	Pongo abelii	40.38	3.00e-85	306.00
IUUC-Pop-100032	Populus trichocarpa	41.08	9.00e-82	295.00
IUUC-Pca-100403	Procavia capensis	51.22	4.00e-69	252.00
IUUC-Ppe-101997	Prunus persica	39.82	2.00e-81	294.00
IUUC-Pva-102423	Pteropus vampyrus	39.53	3.00e-85	306.00
IUUC-Pgr-103339	Puccinia graminis	43.12	3.00e-93	333.00
IUUC-Ptt-103937	Puccinia triticina	43.67	5.00e-93	333.00
IUUC-Pte-104051	Pyrenophora teres	45.41	6.00e-99	352.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	45.65	2.00e-99	354.00
IUUC-Rno-106118	Rattus norvegicus	41.58	5.00e-83	299.00
IUUC-Sce-106330	Saccharomyces cerevisiae	44.72	2.00e-96	344.00
IUUC-Sha-106564	Sarcophilus harrisii	38.50	9.00e-60	221.00
IUUC-Spo-108351	Schizosaccharomyces pombe	63.79	2.00e-174	603.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	44.21	4.00e-100	356.00
IUUC-Smo-109619	Selaginella moellendorffii	36.16	5.00e-73	266.00
IUUC-Sit-110719	Setaria italica	39.77	9.00e-74	268.00
IUUC-Sly-111245	Solanum lycopersicum	39.05	3.00e-75	273.00
IUUC-Stu-112645	Solanum tuberosum	39.55	1.00e-80	291.00
IUUC-Sar-113342	Sorex araneus	39.65	2.00e-78	283.00
IUUC-Sbi-114359	Sorghum bicolor	39.77	9.00e-74	268.00
IUUC-Sre-115098	Sporisorium reilianum	44.52	7.00e-92	328.00
IUUC-Ssc-115496	Sus scrofa	40.86	8.00e-85	305.00
IUUC-Tru-117662	Takifugu rubripes	42.72	1.00e-83	301.00
IUUC-Tni-120564	Tetraodon nigroviridis	40.66	7.00e-66	242.00
IUUC-Tca-121710	Theobroma cacao	39.50	1.00e-82	298.00
IUUC-Tre-122239	Trichoderma reesei	45.41	3.00e-100	356.00
IUUC-Tvi-122589	Trichoderma virens	46.72	2.00e-101	360.00
IUUC-Tae-122903	Triticum aestivum	39.40	3.00e-79	286.00
IUUC-Tur-126135	Triticum urartu	42.04	5.00e-63	233.00
IUUC-Tme-127073	Tuber melanosporum	46.27	2.00e-94	337.00
IUUC-Ttr-128383	Tursiops truncatus	39.57	2.00e-82	297.00
IUUC-Uma-129345	Ustilago maydis	44.85	1.00e-96	345.00
IUUC-Vda-129893	Verticillium dahliae	44.27	3.00e-98	350.00
IUUC-Vvi-131067	Vitis vinifera	41.71	2.00e-82	297.00
IUUC-Xtr-132603	Xenopus tropicalis	43.03	4.00e-90	322.00
IUUC-Xma-133149	Xiphophorus maculatus	42.82	2.00e-84	303.00
IUUC-Yli-134459	Yarrowia lipolytica	44.04	1.00e-97	348.00
IUUC-Zma-135548	Zea mays	39.30	3.00e-73	267.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence