iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014108

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100829039; BRADI_4g23700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G23700	BRADI4G23700.1	BRADI4G23700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-15	55.8	285	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           ++cl+f  +++l+ +Gs  g  ++WDlrt ++l
   Q: 285  IRCLSFsaNSHLIFAGSSSGYAHCWDLRTLRPL 317
           9******8669*****************98876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEASSSRSGT LPSKRRSTGG GGHQPSAQSL NDDALRCIFS RLTDHFDLAR CSAVCNSWHT 60
IIDTAHLMRD LYYKRNPQAR IPGSAISMKS YFEALAMNEH ASALARGPAE VHQWTGHAMR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGA GCAGCAGCCG GAGCGGAACT CTACCCTCGA AGCGGCGCAG CACCGGCGGC 60
GGCGGGCACC AGCCCTCGGC GCAGTCGCTG AACGACGACG CCCTCCGCTG CATCTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00320--WD40

KEGG

bdi:100829039

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	45.18	1.00e-90	325.00
IUUC-Aly-005690	Arabidopsis lyrata	41.46	7.00e-99	353.00
IUUC-Ath-006699	Arabidopsis thaliana	40.00	1.00e-94	339.00
IUUC-Bol-015377	Brassica oleracea	43.44	5.00e-102	363.00
IUUC-Bra-016934	Brassica rapa	45.10	5.00e-89	320.00
IUUC-Gma-043394	Glycine max	45.56	1.00e-96	345.00
IUUC-Lpe-051613	Leersia perrieri	73.22	0.00e+00	629.00
IUUC-Mtr-057690	Medicago truncatula	45.81	1.00e-97	348.00
IUUC-Mac-064938	Musa acuminata	59.25	7.00e-114	402.00
IUUC-Oba-075418	Oryza barthii	77.25	2.00e-177	613.00
IUUC-Obr-076882	Oryza brachyantha	76.29	0.00e+00	687.00
IUUC-Ogl-077438	Oryza glaberrima	77.14	0.00e+00	683.00
IUUC-Ogu-078943	Oryza glumaepatula	77.62	0.00e+00	688.00
IUUC-Oin-079069	Oryza indica	77.38	0.00e+00	686.00
IUUC-Olo-080409	Oryza longistaminata	70.67	6.00e-177	612.00
IUUC-Oni-083056	Oryza nivara	76.90	0.00e+00	682.00
IUUC-Opu-084172	Oryza punctata	77.62	0.00e+00	689.00
IUUC-Oru-085030	Oryza rufipogon	77.14	0.00e+00	685.00
IUUC-Osa-085520	Oryza sativa	77.14	0.00e+00	685.00
IUUC-Ppa-095450	Physcomitrella patens	26.80	1.00e-34	140.00
IUUC-Pop-099796	Populus trichocarpa	46.15	5.00e-101	360.00
IUUC-Ppe-101252	Prunus persica	45.99	1.00e-102	365.00
IUUC-Smo-109369	Selaginella moellendorffii	32.31	1.00e-36	145.00
IUUC-Sit-109830	Setaria italica	76.26	0.00e+00	670.00
IUUC-Sly-111786	Solanum lycopersicum	47.74	2.00e-99	355.00
IUUC-Sbi-114102	Sorghum bicolor	76.79	0.00e+00	672.00
IUUC-Tca-121562	Theobroma cacao	48.46	3.00e-102	364.00
IUUC-Tae-122920	Triticum aestivum	87.98	0.00e+00	769.00
IUUC-Tur-126707	Triticum urartu	72.07	1.00e-178	618.00
IUUC-Vvi-131441	Vitis vinifera	48.94	2.00e-110	391.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence