iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114102

UUCD1 version

UUC-SoB-00920

Ensembl Protein ID

Sb05g005350.1

UniProt Accession

A0A1B6PQI8; A0A1B6PQI8_SORBI

Genbank Protein ID

KXG27926.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G063700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g005350	Sb05g005350.1	Sb05g005350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-14	52.4	242	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           H+++vtcla+ +d l+v Gs  g++ + D ++g 
   Q: 242  HSSPVTCLALtDDQLIVGGSTFGSVAIADQTSGQ 275
           9*********666**************9988876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEASGSRGRS GSAVPKRRRG VGAATGSGST AQSLNDDILR SVFSRLDDHF DLARCSAVCG 60
TWNRIIETAH LMKDLYYKRN PSVRGSSSNI SVKSYFEMLA MDEHASSFSR GPAEAFQWIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAGAGACA CAGGGAGCGC AGCGCGCAGT ACACCAGCCA TGGAGGCGAG CGGCAGTCGG 60
GGCCGGAGCG GGAGCGCGGT TCCCAAGCGC CGCAGAGGCG TCGGCGCGGC TACCGGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	46.68	7.00e-89	320.00
IUUC-Aly-005690	Arabidopsis lyrata	41.61	4.00e-97	347.00
IUUC-Ath-006699	Arabidopsis thaliana	40.60	9.00e-98	349.00
IUUC-Bdi-014108	Brachypodium distachyon	74.61	0.00e+00	686.00
IUUC-Bol-015377	Brassica oleracea	44.33	4.00e-105	374.00
IUUC-Bra-016934	Brassica rapa	47.68	3.00e-93	334.00
IUUC-Gma-043394	Glycine max	45.83	2.00e-101	362.00
IUUC-Lpe-051613	Leersia perrieri	80.73	0.00e+00	678.00
IUUC-Mtr-057690	Medicago truncatula	45.25	1.00e-101	362.00
IUUC-Mac-064938	Musa acuminata	61.31	8.00e-114	402.00
IUUC-Oba-075418	Oryza barthii	82.34	0.00e+00	644.00
IUUC-Obr-076882	Oryza brachyantha	81.40	0.00e+00	726.00
IUUC-Ogl-077438	Oryza glaberrima	82.93	0.00e+00	725.00
IUUC-Ogu-078943	Oryza glumaepatula	82.93	0.00e+00	724.00
IUUC-Oin-079069	Oryza indica	82.68	0.00e+00	723.00
IUUC-Olo-080409	Oryza longistaminata	74.00	0.00e+00	640.00
IUUC-Oni-083056	Oryza nivara	81.95	0.00e+00	716.00
IUUC-Opu-084172	Oryza punctata	84.07	0.00e+00	731.00
IUUC-Oru-085030	Oryza rufipogon	82.44	0.00e+00	721.00
IUUC-Osa-085520	Oryza sativa	82.44	0.00e+00	721.00
IUUC-Ppa-095450	Physcomitrella patens	32.00	3.00e-37	148.00
IUUC-Pop-099796	Populus trichocarpa	47.95	4.00e-104	370.00
IUUC-Ppe-101252	Prunus persica	47.56	1.00e-102	365.00
IUUC-Smo-109369	Selaginella moellendorffii	31.01	8.00e-33	133.00
IUUC-Sit-109830	Setaria italica	86.76	0.00e+00	746.00
IUUC-Sly-111786	Solanum lycopersicum	48.54	2.00e-103	368.00
IUUC-Tca-121562	Theobroma cacao	49.88	9.00e-107	379.00
IUUC-Tae-123446	Triticum aestivum	76.81	0.00e+00	678.00
IUUC-Tur-126707	Triticum urartu	64.11	4.00e-157	546.00
IUUC-Vvi-131441	Vitis vinifera	53.98	2.00e-117	414.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence