iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114190

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G067200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g005700	Sb05g005700.1	Sb05g005700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-19	67.7	444	474

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++s+++++f +d ++l+sG+ D +++vW++
   Q: 444  HEGSIWSIKFsPDgRFLASGGEDSVVRVWEV 474
           9**********999***************97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQEPSRIMSQ ETDGEVAGVA NSHDDKADHV HGTIRRRADA DSEEDDGERG GGGHEPFFQC 60
LDQEQPPDTA HYLHDARVEF PSDEDGDGDD VRFSFATADG DHLLEDQAEL DLDVEEEDEE 120

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Nucleotide Sequence
(Fasta)

ATGCAAGAAC CGTCACGAAT CATGAGCCAA GAGACCGACG GGGAGGTCGC CGGCGTTGCC 60
AACAGCCATG ACGACAAGGC AGACCACGTC CATGGCACGA TCAGACGCCG GGCCGACGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_05g005620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogl-077609	Oryza glaberrima	50.45	1.00e-172	599.00
IUUC-Ogu-078960	Oryza glumaepatula	50.57	3.00e-173	601.00
IUUC-Oin-079641	Oryza indica	50.00	2.00e-168	585.00
IUUC-Oni-083068	Oryza nivara	50.57	2.00e-171	595.00
IUUC-Osa-085562	Oryza sativa	50.46	5.00e-171	594.00
IUUC-Sit-110016	Setaria italica	68.20	0.00e+00	671.00
IUUC-Tae-123367	Triticum aestivum	48.70	4.00e-168	584.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence