iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099046

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_282582; POPTR_0006s11280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s11280	POPTR_0006s11280.1	POPTR_0006s11280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-06	28.5	363	404

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC++ f   +++  lpC H++h  C+  w       s + +CPlCr
   Q: 363  CAICKDLFpiGTEVNKLPCLHLYHPYCILPW------LSARNSCPLCR 404
           ******9977555999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDRVLQRTSQ DVPLSTAHIH VNGGFVADHP SHSALCALCR SILVPDNDDL EISICGHCKF 60
LLLEDLETPT RDSHLRRLHR GRRTRQNHNT IYGNEDRSID GDSSARLLQR TSSRTTPSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCTTCCTC TCTGTTTAAA ATCTTCACCA TGATCATAAG AGAGAGAAAT TTCACGCGCC 60
TCCTTTCCCT TTCTTCTCCT CTTCGTTCCT TTCCTTTTCT ACTCTCTCTA TCAATTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s11280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000512	Aegilops tauschii	35.87	5.00e-44	171.00
IUUC-Atr-002553	Amborella trichopoda	39.70	7.00e-72	264.00
IUUC-Aly-006228	Arabidopsis lyrata	42.19	2.00e-78	286.00
IUUC-Ath-007294	Arabidopsis thaliana	43.97	5.00e-66	244.00
IUUC-Ame-011175	Astyanax mexicanus	45.36	2.00e-19	87.80
IUUC-Bdi-014671	Brachypodium distachyon	35.99	2.00e-44	174.00
IUUC-Bol-015156	Brassica oleracea	40.96	9.00e-59	220.00
IUUC-Bra-017773	Brassica rapa	42.12	8.00e-58	217.00
IUUC-Cja-019559	Callithrix jacchus	45.05	1.00e-18	84.70
IUUC-Cpo-022238	Cavia porcellus	43.88	3.00e-19	87.40
IUUC-Csa-023787	Chlorocebus sabaeus	45.05	2.00e-18	84.30
IUUC-Dre-028637	Danio rerio	47.42	3.00e-22	97.10
IUUC-Dno-029183	Dasypus novemcinctus	43.96	4.00e-18	83.20
IUUC-Dor-030499	Dipodomys ordii	42.06	8.00e-20	89.00
IUUC-Eca-033768	Equus caballus	45.05	4.00e-19	86.70
IUUC-Gac-042217	Gasterosteus aculeatus	44.55	3.00e-21	94.00
IUUC-Gma-044264	Glycine max	47.33	1.00e-100	359.00
IUUC-Ggo-044890	Gorilla gorilla	45.05	1.00e-18	85.10
IUUC-Hsa-045980	Homo sapiens	46.15	3.00e-19	87.00
IUUC-Hvu-047461	Hordeum vulgare	34.43	2.00e-50	192.00
IUUC-Lpe-051546	Leersia perrieri	38.31	1.00e-42	168.00
IUUC-Mtr-058205	Medicago truncatula	47.15	1.00e-99	356.00
IUUC-Nle-069091	Nomascus leucogenys	43.96	1.00e-17	81.60
IUUC-Ocu-074317	Oryctolagus cuniculus	46.15	4.00e-19	86.70
IUUC-Obr-076852	Oryza brachyantha	37.01	1.00e-41	165.00
IUUC-Ogu-078441	Oryza glumaepatula	35.51	4.00e-51	195.00
IUUC-Oin-079290	Oryza indica	36.64	4.00e-41	160.00
IUUC-Olo-080680	Oryza longistaminata	35.98	1.00e-46	180.00
IUUC-Oni-082704	Oryza nivara	33.63	3.00e-52	199.00
IUUC-Opu-083695	Oryza punctata	33.33	3.00e-42	167.00
IUUC-Oru-085044	Oryza rufipogon	35.73	9.00e-47	181.00
IUUC-Osa-086033	Oryza sativa	33.41	1.00e-52	200.00
IUUC-Oga-088998	Otolemur garnettii	50.00	9.00e-18	82.40
IUUC-Ptr-091537	Pan troglodytes	45.05	1.00e-18	85.10
IUUC-Pan-091865	Papio anubis	45.05	2.00e-18	84.30
IUUC-Pfo-097473	Poecilia formosa	43.12	5.00e-21	92.80
IUUC-Pab-097986	Pongo abelii	45.05	1.00e-18	85.10
IUUC-Ppe-101517	Prunus persica	56.00	5.00e-99	353.00
IUUC-Rno-105300	Rattus norvegicus	41.90	6.00e-19	86.30
IUUC-Sit-110240	Setaria italica	39.13	3.00e-34	140.00
IUUC-Stu-112213	Solanum tuberosum	38.98	1.00e-71	263.00
IUUC-Tca-121683	Theobroma cacao	51.89	9.00e-118	416.00
IUUC-Tae-124029	Triticum aestivum	34.82	5.00e-49	188.00
IUUC-Tur-126513	Triticum urartu	34.78	2.00e-42	166.00
IUUC-Xma-133809	Xiphophorus maculatus	43.12	5.00e-21	92.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence