iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114592

UUCD1 version

UUC-SoB-00885

Ensembl Protein ID

Sb05g002550.1

UniProt Accession

A0A1B6PPV5; A0A1B6PPV5_SORBI

Genbank Protein ID

KXG27700.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G030200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g002550	Sb05g002550.1	Sb05g002550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-08	34.0	121	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle++   d ++++pC H fh+ C+  w       + + +CPlCr
   Q: 121  CAVCLEEYeaGDALRTMPCAHGFHERCIFGW------LRLSRLCPLCR 162
           ********66334******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDADGSSSGG VSSTSATDQQ GPRADPELPQ QTDGVYVIAF TRNLAPIAPS RVRMQLGRND 60
MEPTVIFLES RDGDGDADAG AHDDAHGGLF GFGFGAVPAS GVAMACLPET TVGEAKERGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCCG ACGGCAGCAG CTCCGGCGGC GTTTCCTCGA CGTCCGCCAC CGACCAGCAG 60
GGGCCTCGTG CGGACCCCGA GCTGCCGCAG CAGACGGACG GCGTCTATGT CATCGCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000298	Aegilops tauschii	55.84	4.00e-18	82.80
IUUC-Bdi-015023	Brachypodium distachyon	55.41	3.00e-19	87.00
IUUC-Hvu-047603	Hordeum vulgare	54.93	8.00e-18	81.60
IUUC-Lpe-050982	Leersia perrieri	53.85	4.00e-18	82.80
IUUC-Oba-075208	Oryza barthii	59.46	7.00e-21	92.80
IUUC-Obr-076520	Oryza brachyantha	66.22	1.00e-24	105.00
IUUC-Ogl-077486	Oryza glaberrima	59.46	7.00e-21	92.80
IUUC-Ogu-078520	Oryza glumaepatula	53.25	5.00e-16	77.40
IUUC-Oin-079786	Oryza indica	59.46	2.00e-21	94.70
IUUC-Olo-081044	Oryza longistaminata	60.53	1.00e-21	97.10
IUUC-Ome-081635	Oryza meridionalis	60.00	2.00e-19	90.10
IUUC-Oni-083093	Oryza nivara	60.56	3.00e-21	96.30
IUUC-Oru-084388	Oryza rufipogon	58.11	9.00e-21	92.40
IUUC-Osa-086245	Oryza sativa	59.46	6.00e-21	92.80
IUUC-Sit-109985	Setaria italica	77.46	1.00e-22	99.00
IUUC-Tae-125548	Triticum aestivum	62.50	1.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence