iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047783

Ensembl Protein ID

MLOC_66641.4

UniProt Accession

F2E5E0; F2E5E0_HORVV

Genbank Protein ID

BAK02562.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

AK371364

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_66641	MLOC_66641.4	MLOC_66641.4
MLOC_66641	MLOC_66641.5	MLOC_66641.5
MLOC_66641	MLOC_66641.8	MLOC_66641.8

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.20e-26	91.6	21	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++e flCp+++++MrdPv+l+sG t++r++I kw++++ +      cP+tr++l++++l P+++lr++i++w+++n+ 
   Q: 21   IYESFLCPLTKQIMRDPVTLESGATFEREAILKWFKESDSsgrslVCPITRKELSSTELNPSIALRNTIDEWMHRNQA 98
           799********************************665555668*******************************985 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MADVQDGQYD SSTDSLRVEP IYESFLCPLT KQIMRDPVTL ESGATFEREA ILKWFKESDS 60
SGRSLVCPIT RKELSSTELN PSIALRNTID EWMHRNQAAK LDVARKSLTS ENSEHDTLQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCGGCTTC GCTTACCCAC TCAAGCAGTC TAGCTGACTA GTAAGCAGCA ACAGGGCACC 60
AGCATTCGTC GCCGAGAAGT ATCTCCCTTC CGCTCCCCTC TCCCCTAACC CTCCCCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	98.76	0.00e+00	1599.00
IUUC-Atr-002916	Amborella trichopoda	61.30	0.00e+00	957.00
IUUC-Aly-005480	Arabidopsis lyrata	58.59	0.00e+00	837.00
IUUC-Ath-007569	Arabidopsis thaliana	58.84	0.00e+00	841.00
IUUC-Bdi-014487	Brachypodium distachyon	90.58	0.00e+00	1470.00
IUUC-Bol-015955	Brassica oleracea	57.77	0.00e+00	800.00
IUUC-Bra-017511	Brassica rapa	57.32	0.00e+00	796.00
IUUC-Gma-044318	Glycine max	66.42	0.00e+00	1069.00
IUUC-Itr-049073	Ictidomys tridecemlineatus	27.73	2.00e-07	49.30
IUUC-Lpe-050971	Leersia perrieri	87.47	0.00e+00	1357.00
IUUC-Mtr-058511	Medicago truncatula	66.17	0.00e+00	1043.00
IUUC-Mac-064911	Musa acuminata	65.84	0.00e+00	1012.00
IUUC-Oba-075225	Oryza barthii	87.84	0.00e+00	1412.00
IUUC-Obr-076103	Oryza brachyantha	88.71	0.00e+00	1375.00
IUUC-Ogl-077529	Oryza glaberrima	87.97	0.00e+00	1416.00
IUUC-Ogu-078735	Oryza glumaepatula	87.84	0.00e+00	1412.00
IUUC-Oin-079422	Oryza indica	87.47	0.00e+00	1386.00
IUUC-Olo-080644	Oryza longistaminata	80.65	0.00e+00	1264.00
IUUC-Ome-081455	Oryza meridionalis	87.47	0.00e+00	1405.00
IUUC-Oni-082690	Oryza nivara	87.34	0.00e+00	1384.00
IUUC-Opu-083157	Oryza punctata	88.34	0.00e+00	1412.00
IUUC-Oru-085058	Oryza rufipogon	87.47	0.00e+00	1386.00
IUUC-Osa-086000	Oryza sativa	87.47	0.00e+00	1386.00
IUUC-Ppa-096021	Physcomitrella patens	47.77	0.00e+00	715.00
IUUC-Pop-099966	Populus trichocarpa	66.01	0.00e+00	1054.00
IUUC-Ppe-101973	Prunus persica	64.33	0.00e+00	1020.00
IUUC-Ssl-108555	Sclerotinia sclerotiorum	30.91	2.50e-02	32.00
IUUC-Smo-109219	Selaginella moellendorffii	46.45	0.00e+00	670.00
IUUC-Sit-110490	Setaria italica	85.68	0.00e+00	1350.00
IUUC-Sly-111702	Solanum lycopersicum	65.93	0.00e+00	971.00
IUUC-Stu-111962	Solanum tuberosum	65.07	0.00e+00	1028.00
IUUC-Ssc-115521	Sus scrofa	27.73	5.00e-08	51.20
IUUC-Tca-121113	Theobroma cacao	67.04	0.00e+00	1074.00
IUUC-Tur-126573	Triticum urartu	98.27	0.00e+00	1598.00
IUUC-Ttr-129113	Tursiops truncatus	27.73	3.00e-07	48.90
IUUC-Vvi-131623	Vitis vinifera	67.04	0.00e+00	1102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence