iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114583

UUCD1 version

UUC-SoB-01239

Ensembl Protein ID

Sb08g018765.1

UniProt Accession

A0A1B6PDJ2; A0A1B6PDJ2_SORBI

Genbank Protein ID

KXG23753.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G136200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g018765	Sb08g018765.1	Sb08g018765.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-18	65.3	129	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 23   sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           + +ty+r+ Iekw+asg++tcP t+q++ +++l+Pn++lr+li +wce+n++
   Q: 129  TEQTYERAFIEKWIASGHHTCPNTQQRMPNTTLTPNYVLRSLIAQWCEANGI 180
           679**********************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGEAAERVA AAVEAVGSGG WEFRNAYRRQ LLALSRRIRL LGPFAEELRE ARRGRPAEEE 60
EEQERALAPL ADALEEALDL LQLGRDGSRI FLVLDRNKVM KKFHESIAQL EQALCDFPYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGGAGGA CGCGGTCCGG TTCACGCCGC CTCGACTCGC CTCGGCCCTC GCCGCCATGG 60
CCGGCGAGGC CGCGGAGAGG GTGGCCGCCG CCGTGGAGGC GGTGGGATCC GGTGGCTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047396	Hordeum vulgare	86.52	1.00e-171	595.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence