iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113970

UUCD1 version

UUC-SoB-01242

Ensembl Protein ID

Sb08g019370.1

UniProt Accession

A0A1B6PDM4; A0A1B6PDM4_SORBI

Genbank Protein ID

KXG23810.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G143100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g019370	Sb08g019370.1	Sb08g019370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-08	34.3	193	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++    dg++ l+C H+fh  Cl +w       + ++ CP+Cr
   Q: 193  CSICLERCadsGDGLIQLRCRHIFHSACLDRW------LRSHADCPYCR 235
           ******9977777799****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPIASKLVYF QRRPCRDHHR RRRRSSLSSS HHKPGQDHVP GHQRDAAAKP LGSVGNIAEH 60
AAGMSSSTRL HRSISDHGRL PDAVHQARER LLQRLNSVDL SGRRQKTWPS ESFWAGLTRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAGCAGGT GGAGTTCAGT GGAGCTGGAA CTGGAGCTGT AACAATTCGC CACAGCCTCC 60
TCCCTCCCCC CTTCTCTTCT TGCATGCCGA TCGCCTCCAA GCTCGTCTAC TTCCAGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000649	Aegilops tauschii	56.28	2.00e-53	201.00
IUUC-Bdi-014491	Brachypodium distachyon	60.56	4.00e-51	192.00
IUUC-Hvu-047212	Hordeum vulgare	59.46	3.00e-20	88.20
IUUC-Lpe-050997	Leersia perrieri	49.42	1.00e-54	205.00
IUUC-Mac-064874	Musa acuminata	33.33	3.00e-18	84.70
IUUC-Oba-075323	Oryza barthii	52.86	1.00e-51	196.00
IUUC-Obr-076811	Oryza brachyantha	55.39	3.00e-52	197.00
IUUC-Ogl-077874	Oryza glaberrima	48.84	2.00e-55	207.00
IUUC-Ogu-078106	Oryza glumaepatula	51.98	1.00e-47	182.00
IUUC-Olo-080424	Oryza longistaminata	52.86	3.00e-52	197.00
IUUC-Ome-081444	Oryza meridionalis	52.61	2.00e-44	171.00
IUUC-Oni-082312	Oryza nivara	51.89	4.00e-52	197.00
IUUC-Opu-083882	Oryza punctata	51.44	2.00e-47	182.00
IUUC-Oru-085121	Oryza rufipogon	52.36	2.00e-52	198.00
IUUC-Osa-085586	Oryza sativa	48.84	2.00e-55	207.00
IUUC-Pgr-103357	Puccinia graminis	48.00	9.00e-09	53.10
IUUC-Sit-110410	Setaria italica	53.41	6.00e-60	223.00
IUUC-Tae-123452	Triticum aestivum	51.09	3.00e-59	220.00
IUUC-Tur-126102	Triticum urartu	54.72	1.00e-55	208.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence