iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110063

Ensembl Protein ID

Si022975m

UniProt Accession

K3Z8V5; K3Z8V5_SETIT

Genbank Protein ID

KQL17090.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM003530

Gene Name

LOC101766475; SETIT_022975mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si022975m.g	Si022975m	Si022975m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	7.90e-17	62.2	149	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl+ + ++++L ka+++ +                        l++se+ ++YeD+dGD++ l++D++++++v+      s++rl
   Q: 149  FVKVSLDGAPYLRKVDLKMYKSYQELSKALEKmFSsftigscgsqgmngmnesklvdLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVE------SCKRL 241
           8*******************************622566999***************99999***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 242  RIMK 245
           ***8 PP

Organism

Setaria italica

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAADLGFEET ELRLGLPGGG GGGGGGDGEG TRSASGKRGF AETIDLKLKL EPAAAAVVAE 60
DEEVDAAAEE SSPAGKMKRS PSQSSVVTAA AQPDPAEKPR APKAQVVGWP PVRSFRKNIM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTCGTTAG CTCCCTTCCT CTTTATCTAC TTCCCTTCCA TTGCATTTGC ATGCCTTTAC 60
ATTGCAATTG AAAAGCAGCC TCCTACCACC CTCTCAAAGC AACCAACAAG CAAGAAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sita:101766475

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	60.59	2.00e-77	281.00
IUUC-Aly-006188	Arabidopsis lyrata	54.61	5.00e-61	226.00
IUUC-Ath-007356	Arabidopsis thaliana	56.83	3.00e-66	243.00
IUUC-Bdi-014859	Brachypodium distachyon	71.79	2.00e-85	307.00
IUUC-Bol-016371	Brassica oleracea	58.40	3.00e-66	244.00
IUUC-Bra-016936	Brassica rapa	57.14	4.00e-64	236.00
IUUC-Gma-044404	Glycine max	79.50	1.00e-70	258.00
IUUC-Hvu-047087	Hordeum vulgare	82.10	4.00e-75	272.00
IUUC-Lpe-050724	Leersia perrieri	60.58	4.00e-57	213.00
IUUC-Loc-052748	Lepisosteus oculatus	31.63	7.70e-01	28.50
IUUC-Mtr-058641	Medicago truncatula	61.22	4.00e-76	276.00
IUUC-Mac-065144	Musa acuminata	66.95	5.00e-84	303.00
IUUC-Oba-075945	Oryza barthii	68.90	9.00e-86	308.00
IUUC-Obr-076745	Oryza brachyantha	71.11	8.00e-87	312.00
IUUC-Ogu-078911	Oryza glumaepatula	69.72	3.00e-92	330.00
IUUC-Oin-079136	Oryza indica	69.96	7.00e-86	309.00
IUUC-Oni-082674	Oryza nivara	71.73	1.00e-85	308.00
IUUC-Osa-086164	Oryza sativa	69.96	7.00e-86	309.00
IUUC-Ppa-095740	Physcomitrella patens	42.08	1.00e-32	133.00
IUUC-Pfo-096634	Poecilia formosa	30.61	1.10e+00	27.70
IUUC-Pop-099218	Populus trichocarpa	61.15	5.00e-79	286.00
IUUC-Ppe-101719	Prunus persica	60.78	2.00e-71	261.00
IUUC-Sly-111769	Solanum lycopersicum	60.08	7.00e-76	276.00
IUUC-Stu-112038	Solanum tuberosum	59.92	4.00e-73	266.00
IUUC-Sbi-114725	Sorghum bicolor	80.33	2.00e-91	327.00
IUUC-Tca-121532	Theobroma cacao	63.22	8.00e-76	275.00
IUUC-Tae-124253	Triticum aestivum	72.10	2.00e-89	321.00
IUUC-Vvi-131523	Vitis vinifera	63.20	3.00e-71	260.00
IUUC-Xma-134033	Xiphophorus maculatus	30.61	1.40e+00	27.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence