iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016891

Ensembl Protein ID

Bra038829.1-P

UniProt Accession

M4FCL0; M4FCL0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038829	Bra038829.1	Bra038829.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-14	53.8	430	465

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H+++v+ l+f sd  +l sG++ g++ vW l+tg++
   Q: 430  HSAEVNVLNFsSDgAYLYSGGREGVLVVWQLDTGKK 465
           999********999******************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPINKDPSTP PPVIGKIGPY TVFMTPPATP KPPESPAAVS QKPNLPPPVL PPPQQFKSVA 60
SSAQDGSVLG FFKNAATKVQ NAHSSVDDHL VRWFGLNQSK YQWALDEYYE GKGSKNRKKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGATCA ACAAAGACCC ATCAACACCT CCTCCGGTCA TCGGCAAAAT CGGTCCTTAC 60
ACTGTCTTCA TGACTCCTCC GGCCACTCCA AAACCACCTG AATCTCCCGC CGCCGTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001159	Aegilops tauschii	42.43	5.00e-168	584.00
IUUC-Aml-001772	Ailuropoda melanoleuca	25.84	7.00e-43	168.00
IUUC-Atr-003057	Amborella trichopoda	51.33	0.00e+00	788.00
IUUC-Apl-004225	Anas platyrhynchos	25.52	1.00e-35	144.00
IUUC-Aca-004528	Anolis carolinensis	26.77	1.00e-48	187.00
IUUC-Aly-005971	Arabidopsis lyrata	88.82	0.00e+00	1465.00
IUUC-Ath-007216	Arabidopsis thaliana	89.07	0.00e+00	1478.00
IUUC-Afu-009094	Aspergillus fumigatus	29.84	4.00e-20	92.80
IUUC-Ani-009273	Aspergillus nidulans	26.19	2.00e-17	84.30
IUUC-Ate-010477	Aspergillus terreus	24.50	9.00e-18	85.50
IUUC-Ame-011596	Astyanax mexicanus	24.33	3.00e-46	179.00
IUUC-Bta-013087	Bos taurus	25.26	3.00e-44	173.00
IUUC-Bdi-014281	Brachypodium distachyon	49.01	0.00e+00	753.00
IUUC-Bol-015950	Brassica oleracea	95.88	0.00e+00	1562.00
IUUC-Cja-019291	Callithrix jacchus	25.83	3.00e-40	160.00
IUUC-Cfa-020826	Canis familiaris	25.74	1.00e-43	171.00
IUUC-Cpo-022075	Cavia porcellus	25.34	3.00e-46	179.00
IUUC-Cre-022871	Chlamydomonas reinhardtii	34.41	5.00e-11	59.30
IUUC-Csa-023922	Chlorocebus sabaeus	25.74	3.00e-45	176.00
IUUC-Cho-025070	Choloepus hoffmanni	25.53	1.00e-41	164.00
IUUC-Cin-025661	Ciona intestinalis	25.90	2.00e-20	93.60
IUUC-Cgl-026473	Colletotrichum gloeosporioides	29.22	3.00e-12	67.00
IUUC-Cne-026862	Cryptococcus neoformans	23.58	3.00e-24	107.00
IUUC-Cme-027187	Cyanidioschyzon merolae	34.07	7.00e-08	52.80
IUUC-Dre-028194	Danio rerio	26.23	3.00e-50	192.00
IUUC-Dno-029393	Dasypus novemcinctus	24.56	4.00e-34	139.00
IUUC-Dor-030476	Dipodomys ordii	25.28	5.00e-25	109.00
IUUC-Dse-031561	Dothistroma septosporum	28.91	8.00e-17	82.80
IUUC-Dme-031625	Drosophila melanogaster	25.47	6.00e-23	102.00
IUUC-Ete-033185	Echinops telfairi	25.87	1.00e-40	160.00
IUUC-Eca-034192	Equus caballus	25.45	7.00e-44	172.00
IUUC-Eeu-034737	Erinaceus europaeus	27.31	3.00e-16	80.10
IUUC-Fca-036473	Felis catus	25.58	2.00e-46	180.00
IUUC-Fal-037083	Ficedula albicollis	24.25	1.00e-35	144.00
IUUC-Fox-037801	Fusarium oxysporum	22.91	4.00e-15	76.60
IUUC-Fso-038117	Fusarium solani	22.10	3.00e-15	77.00
IUUC-Gmo-038612	Gadus morhua	26.79	3.00e-47	182.00
IUUC-Ggr-040067	Gaeumannomyces graminis	22.98	1.00e-13	72.40
IUUC-Gga-040173	Gallus gallus	25.73	1.00e-25	110.00
IUUC-Gac-042628	Gasterosteus aculeatus	26.84	3.00e-50	193.00
IUUC-Gma-043929	Glycine max	56.18	0.00e+00	857.00
IUUC-Ggo-044723	Gorilla gorilla	25.88	9.00e-45	175.00
IUUC-Hsa-045976	Homo sapiens	25.74	7.00e-45	175.00
IUUC-Itr-048873	Ictidomys tridecemlineatus	25.52	8.00e-44	171.00
IUUC-Lch-049534	Latimeria chalumnae	26.47	2.00e-47	183.00
IUUC-Lpe-050961	Leersia perrieri	49.32	0.00e+00	758.00
IUUC-Loc-052545	Lepisosteus oculatus	25.42	2.00e-41	163.00
IUUC-Laf-053408	Loxodonta africana	25.47	2.00e-45	177.00
IUUC-Mcc-055400	Macaca mulatta	25.59	4.00e-45	176.00
IUUC-Meu-056448	Macropus eugenii	28.63	9.00e-20	91.70
IUUC-Mor-057047	Magnaporthe oryzae	36.36	2.00e-12	67.80
IUUC-Mpo-057552	Magnaporthe poae	35.23	2.00e-12	67.80
IUUC-Mtr-058588	Medicago truncatula	55.54	0.00e+00	846.00
IUUC-Mla-059102	Melampsora laricipopulina	25.92	6.00e-19	89.70
IUUC-Mga-059364	Meleagris gallopavo	24.60	2.00e-37	150.00
IUUC-Mvi-060387	Microbotryum violaceum	26.96	5.00e-37	149.00
IUUC-Mmr-061240	Microcebus murinus	25.47	3.00e-44	173.00
IUUC-Mdo-062461	Monodelphis domestica	24.60	5.00e-45	176.00
IUUC-Mmu-063820	Mus musculus	24.81	2.00e-43	170.00
IUUC-Mac-064657	Musa acuminata	49.88	0.00e+00	773.00
IUUC-Mpu-066642	Mustela putorius furo	26.02	6.00e-41	162.00
IUUC-Mlu-067113	Myotis lucifugus	23.82	6.00e-34	139.00
IUUC-Ncr-068881	Neurospora crassa	23.17	2.00e-21	98.20
IUUC-Nle-069700	Nomascus leucogenys	25.59	2.00e-44	174.00
IUUC-Opr-070788	Ochotona princeps	26.45	1.00e-33	138.00
IUUC-Ont-071934	Oreochromis niloticus	26.90	3.00e-51	196.00
IUUC-Oan-073397	Ornithorhynchus anatinus	23.99	9.00e-14	70.50
IUUC-Ocu-074934	Oryctolagus cuniculus	25.29	1.00e-44	174.00
IUUC-Oba-075556	Oryza barthii	50.21	0.00e+00	676.00
IUUC-Obr-076321	Oryza brachyantha	49.63	0.00e+00	764.00
IUUC-Ogl-077721	Oryza glaberrima	50.43	0.00e+00	778.00
IUUC-Ogu-078969	Oryza glumaepatula	49.75	0.00e+00	768.00
IUUC-Oin-079774	Oryza indica	50.43	0.00e+00	777.00
IUUC-Olo-080797	Oryza longistaminata	50.21	6.00e-127	447.00
IUUC-Ome-081288	Oryza meridionalis	50.06	0.00e+00	773.00
IUUC-Oni-082679	Oryza nivara	50.56	0.00e+00	778.00
IUUC-Opu-083382	Oryza punctata	49.82	0.00e+00	771.00
IUUC-Oru-085008	Oryza rufipogon	50.19	0.00e+00	774.00
IUUC-Osa-086286	Oryza sativa	50.31	0.00e+00	776.00
IUUC-Ola-087159	Oryzias latipes	26.30	2.00e-46	180.00
IUUC-Olu-087737	Ostreococcus lucimarinus	27.91	9.00e-64	238.00
IUUC-Oga-087932	Otolemur garnettii	25.73	2.00e-43	170.00
IUUC-Oar-090087	Ovis aries	25.15	2.00e-42	167.00
IUUC-Ptr-090836	Pan troglodytes	25.58	8.00e-45	175.00
IUUC-Pan-091703	Papio anubis	24.02	3.00e-39	156.00
IUUC-Psi-093289	Pelodiscus sinensis	25.51	8.00e-39	155.00
IUUC-Pma-094549	Petromyzon marinus	33.85	3.00e-19	90.50
IUUC-Ppa-095363	Physcomitrella patens	36.59	3.00e-136	478.00
IUUC-Pfo-096805	Poecilia formosa	25.54	7.00e-45	175.00
IUUC-Pab-098646	Pongo abelii	25.58	7.00e-45	175.00
IUUC-Pop-099325	Populus trichocarpa	62.39	0.00e+00	1009.00
IUUC-Pca-100866	Procavia capensis	25.48	2.00e-36	147.00
IUUC-Ppe-101421	Prunus persica	62.07	0.00e+00	713.00
IUUC-Pva-103237	Pteropus vampyrus	27.24	7.00e-18	85.90
IUUC-Pgr-103514	Puccinia graminis	26.06	3.00e-15	77.40
IUUC-Pte-104266	Pyrenophora teres	30.71	3.00e-13	70.50
IUUC-Pyt-104657	Pyrenophora triticirepentis	25.93	5.00e-14	73.60
IUUC-Rno-105785	Rattus norvegicus	24.85	3.00e-43	170.00
IUUC-Sha-107623	Sarcophilus harrisii	24.80	2.00e-44	174.00
IUUC-Sja-107756	Schizosaccharomyces japonicus	25.41	2.00e-08	53.90
IUUC-Spo-108237	Schizosaccharomyces pombe	25.17	3.00e-16	80.50
IUUC-Smo-108802	Selaginella moellendorffii	34.90	7.00e-128	451.00
IUUC-Sit-110013	Setaria italica	47.48	0.00e+00	753.00
IUUC-Sly-111872	Solanum lycopersicum	56.02	0.00e+00	879.00
IUUC-Sar-113336	Sorex araneus	29.82	4.00e-08	53.10
IUUC-Sbi-114792	Sorghum bicolor	47.61	0.00e+00	750.00
IUUC-Sre-114923	Sporisorium reilianum	26.35	6.00e-48	186.00
IUUC-Ssc-115517	Sus scrofa	25.94	2.00e-44	174.00
IUUC-Tgu-116868	Taeniopygia guttata	23.90	1.00e-38	154.00
IUUC-Tru-118503	Takifugu rubripes	23.31	8.00e-41	162.00
IUUC-Tsy-119349	Tarsius syrichta	25.47	1.00e-44	174.00
IUUC-Tni-120437	Tetraodon nigroviridis	25.46	6.00e-42	165.00
IUUC-Tca-121127	Theobroma cacao	62.85	0.00e+00	1021.00
IUUC-Tvi-122323	Trichoderma virens	22.60	6.00e-15	76.30
IUUC-Tae-123441	Triticum aestivum	47.81	0.00e+00	744.00
IUUC-Tme-127167	Tuber melanosporum	24.43	5.00e-20	93.60
IUUC-Tbe-127376	Tupaia belangeri	27.31	3.00e-16	80.10
IUUC-Ttr-128949	Tursiops truncatus	25.32	3.00e-39	156.00
IUUC-Uma-129522	Ustilago maydis	27.48	4.00e-51	196.00
IUUC-Vda-129794	Verticillium dahliae	29.55	1.00e-06	48.50
IUUC-Vpa-130282	Vicugna pacos	25.16	5.00e-38	152.00
IUUC-Xtr-132078	Xenopus tropicalis	28.24	8.00e-41	161.00
IUUC-Xma-133958	Xiphophorus maculatus	25.54	5.00e-47	182.00
IUUC-Zma-135807	Zea mays	47.77	0.00e+00	744.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence