iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017561

Ensembl Protein ID

Bra023447.1-P

UniProt Accession

M4E3U4; M4E3U4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023447	Bra023447.1	Bra023447.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-10	40.9	297	331

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +sv++laf  d + l+s+++Dg ++vWDlrt ++l
   Q: 297  GSVRSLAFsEDgKKLLSSGGDGEVYVWDLRTMKCL 331
           79******9556999****************9997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEEDQAEMKK LETLLFGSLY NPATFDDGSA NLFHVNRSAV TLTHTPDYDD DDINQSEGVR 60
KGEAAWEDEE EREISINIAS VNRLRKLRRE EKESSISGSE YIARLRAHHA KLNPGTAWAR 120

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Nucleotide Sequence
(Fasta)

ATGGAGGAAG ATCAAGCTGA AATGAAAAAG CTCGAGACTT TGTTATTCGG GTCTCTCTAT 60
AACCCTGCCA CGTTCGATGA TGGTTCCGCT AATTTGTTTC ATGTGAACCG TTCTGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015617	Brassica oleracea	91.30	0.00e+00	811.00
IUUC-Cel-018293	Caenorhabditis elegans	25.48	3.00e-40	159.00
IUUC-Mvi-060435	Microbotryum violaceum	33.04	4.00e-64	239.00
IUUC-Olu-087644	Ostreococcus lucimarinus	25.47	2.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence