iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107747

Ensembl Protein ID

EEB06557

UniProt Accession

B6JYD9; B6JYD9_SCHJY

Genbank Protein ID

EEB06557.1

Protein Name

WD repeat protein

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01599

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01599	EEB06557	EEB06557

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-12	43.4	107	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH++ vt++++ +  + ++s + D+t+k+WDl +g
   Q: 107  GHKATVTDIQLsPVeDQFLSTGLDKTVKLWDLQRG 141
           8**********9556999*************9776 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

METPVLSSFR PSQILRDNSL QSTISCVDYN DTGELLVTGC DTDGTMHIYQ CLKSGAPPTK 60
ISCKNHGVSV AKFTHHSNNL LHSSPRSDHS IRYFSTHDDT YISMFSGHKA TVTDIQLSPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAATACAA TTCGCGTCGC GTGTCTTGTC GCGTTTCGTA ACCTTAATTC TCCCAAGTTA 60
GTACTACCTA CGAGAAGATT CACAAAACAA AACCCGGTCA CTTTCGCCTC TGTGTTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:1990567--C:DPS complex
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0000790--C:nuclear chromatin
GO:1905213--P:negative regulation of mitotic chromosome condensation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	34.66	2.00e-35	140.00
IUUC-Acl-008217	Aspergillus clavatus	34.78	4.00e-57	213.00
IUUC-Bgr-012008	Blumeria graminis	31.99	3.00e-50	190.00
IUUC-Bci-013966	Botrytis cinerea	35.84	4.00e-54	202.00
IUUC-Cho-024409	Choloepus hoffmanni	30.50	2.00e-36	143.00
IUUC-Cin-025628	Ciona intestinalis	33.24	2.00e-51	193.00
IUUC-Csv-026164	Ciona savignyi	33.33	7.00e-52	195.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	34.82	3.00e-54	203.00
IUUC-Cne-026890	Cryptococcus neoformans	29.77	7.00e-40	155.00
IUUC-Dor-031078	Dipodomys ordii	32.30	1.00e-29	120.00
IUUC-Ete-033158	Echinops telfairi	32.73	1.00e-47	181.00
IUUC-Eeu-035229	Erinaceus europaeus	28.44	7.00e-33	132.00
IUUC-Fox-037858	Fusarium oxysporum	33.05	5.00e-53	199.00
IUUC-Lma-053026	Leptosphaeria maculans	36.86	1.00e-59	221.00
IUUC-Meu-056113	Macropus eugenii	27.03	7.00e-33	132.00
IUUC-Mla-058815	Melampsora laricipopulina	35.77	2.00e-54	204.00
IUUC-Mvi-060411	Microbotryum violaceum	35.39	3.00e-58	217.00
IUUC-Mac-065314	Musa acuminata	33.23	3.00e-41	160.00
IUUC-Ncr-068702	Neurospora crassa	34.48	1.00e-50	191.00
IUUC-Oba-075229	Oryza barthii	31.80	9.00e-32	129.00
IUUC-Ogu-078068	Oryza glumaepatula	31.06	9.00e-32	128.00
IUUC-Oin-079656	Oryza indica	36.25	4.00e-43	166.00
IUUC-Ome-081277	Oryza meridionalis	26.07	1.00e-16	78.20
IUUC-Oni-082990	Oryza nivara	31.50	2.00e-31	128.00
IUUC-Opu-083374	Oryza punctata	30.28	3.00e-30	123.00
IUUC-Oru-084354	Oryza rufipogon	31.50	2.00e-31	128.00
IUUC-Osa-086296	Oryza sativa	36.25	4.00e-43	166.00
IUUC-Olu-087603	Ostreococcus lucimarinus	28.65	5.00e-30	122.00
IUUC-Pva-102798	Pteropus vampyrus	33.93	5.00e-50	189.00
IUUC-Pgr-103395	Puccinia graminis	36.16	1.00e-57	214.00
IUUC-Ptt-103747	Puccinia triticina	35.80	1.00e-55	208.00
IUUC-Pte-104129	Pyrenophora teres	36.04	4.00e-55	207.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	35.04	7.00e-60	222.00
IUUC-Spo-108128	Schizosaccharomyces pombe	53.69	3.00e-105	372.00
IUUC-Sit-109858	Setaria italica	36.25	1.00e-43	167.00
IUUC-Sre-115157	Sporisorium reilianum	31.88	5.00e-51	192.00
IUUC-Tsy-119314	Tarsius syrichta	31.02	2.00e-22	97.10
IUUC-Tre-122205	Trichoderma reesei	36.19	5.00e-58	216.00
IUUC-Tvi-122471	Trichoderma virens	32.13	7.00e-45	172.00
IUUC-Tme-126883	Tuber melanosporum	37.72	2.00e-68	250.00
IUUC-Tbe-127310	Tupaia belangeri	25.17	3.00e-10	57.00
IUUC-Vda-129826	Verticillium dahliae	32.12	6.00e-50	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence