iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134744

UUCD1 version

UUC-ZeM-01298

Ensembl Protein ID

Zm00001d039365_T001

UniProt Accession

B6UBG2; B6UBG2_MAIZE

Genbank Protein ID

ACG46695.1; ACL54360.1; ONM28461.1

Protein Name

Protein transport protein SEC13 homolog B; SEC13-related protein

Genbank Nucleotide ID

EU974577; BT055753; CM007649

Gene Name

ZEAMMB73_Zm00001d039365

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039365	Zm00001d039365_T001	Zm00001d039365_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-32	110.3	53	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +    +l+s+s+Dg + +W 
   Q: 53   GHQGPVWQVAWahPKfgSMLASCSYDGRVIIWK 85
           8***********9444479*************7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPPHKIETGH QDVVHDIAMD YYGKRLATAS SDNTIKIIGV SGTSHQQLAT LSGHQGPVWQ 60
VAWAHPKFGS MLASCSYDGR VIIWKEGSKP DEWALAHTFA EHKSSVNSIA WAPHELGLCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCCCC ATAAGATTGA GACTGGGCAT CAAGATGTGG TCCATGATAT TGCCATGGAT 60
TACTACGGGA AGCGCCTAGC TACAGCCTCC TCTGATAACA CAATAAAGAT CATTGGCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	94.75	9.00e-173	598.00
IUUC-Atr-002825	Amborella trichopoda	79.22	9.00e-144	502.00
IUUC-Bgr-012276	Blumeria graminis	51.02	6.00e-76	276.00
IUUC-Bdi-014818	Brachypodium distachyon	95.41	2.00e-173	600.00
IUUC-Bol-015572	Brassica oleracea	78.10	1.00e-142	498.00
IUUC-Bra-017286	Brassica rapa	77.45	7.00e-142	495.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	55.12	2.00e-94	338.00
IUUC-Cme-027165	Cyanidioschyzon merolae	38.87	5.00e-52	199.00
IUUC-Eeu-035119	Erinaceus europaeus	39.33	4.00e-14	71.60
IUUC-Fso-038341	Fusarium solani	50.00	2.00e-78	284.00
IUUC-Hvu-047835	Hordeum vulgare	94.43	9.00e-172	595.00
IUUC-Lpe-051187	Leersia perrieri	92.16	9.00e-175	607.00
IUUC-Mac-064736	Musa acuminata	85.90	1.00e-154	538.00
IUUC-Oba-075069	Oryza barthii	94.74	6.00e-172	595.00
IUUC-Ogl-077208	Oryza glaberrima	94.74	6.00e-172	595.00
IUUC-Ogu-078513	Oryza glumaepatula	94.74	6.00e-172	595.00
IUUC-Oin-079094	Oryza indica	94.74	6.00e-172	595.00
IUUC-Olo-080473	Oryza longistaminata	94.74	6.00e-172	595.00
IUUC-Ome-081643	Oryza meridionalis	94.74	6.00e-172	595.00
IUUC-Oni-082589	Oryza nivara	94.74	6.00e-172	595.00
IUUC-Opu-083677	Oryza punctata	95.41	2.00e-173	600.00
IUUC-Oru-084537	Oryza rufipogon	94.74	6.00e-172	595.00
IUUC-Osa-085449	Oryza sativa	94.74	6.00e-172	595.00
IUUC-Olu-087893	Ostreococcus lucimarinus	51.03	8.00e-78	283.00
IUUC-Pan-092013	Papio anubis	29.88	7.00e-26	110.00
IUUC-Pop-099402	Populus trichocarpa	79.61	1.00e-144	505.00
IUUC-Sit-110132	Setaria italica	96.39	5.00e-175	605.00
IUUC-Tca-121068	Theobroma cacao	82.39	6.00e-148	516.00
IUUC-Tae-125528	Triticum aestivum	94.43	1.00e-171	594.00
IUUC-Tme-127181	Tuber melanosporum	49.84	2.00e-80	292.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence