iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040714

Ensembl Protein ID

ENSGALP00000029076.2

UniProt Accession

Q5F3D7; UTP15_CHICK

Genbank Protein ID

CAH65347.1

Protein Name

U3 small nucleolar RNA-associated protein 15 homolog

Genbank Nucleotide ID

AJ851713

Gene Name

UTP15; RCJMB04_20m16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000013510.4	ENSGALT00000029725.3	ENSGALP00000029076.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-23	81.9	163	198
UBD/Beta-Prp	2.10e-44	152.3	40	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtc.laf..sdtllvsGsdDgtikvWDlrtgv 34
           H+d v+c +a   +++ +++Gs+D+t+kv+D rt  
   Q: 163  HSDYVRCgCASklNGDVFITGSYDHTVKVFDARTKS 198
           9999***7655756699**************88865 PP

UBD/Beta-Prp

   S: 12   vitcvkf..spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
            i++++f   p +++ +t+s  +++ ++   ++  ++++s  +++ ++ ++ +dgk+lv gse + i+++d+s + +++ + gh++ v 
   Q: 40   AINKIDFspVPPYNYAVTAS--SRVHIYGRYSQEPIKTFSRFKDAAYCATYRDDGKLLVAGSEEGSIRLFDISGRAPLRQFDGHTKAVH 126
           58899995556666666665..******************************************************************* PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
            + f  +++++ sG++d    +wd+++ +++    s+h++ v+c + ++ + +++++Gs+D tv+++d +t++ + t +  h ++v+s+
   Q: 127  VVGFLSDKYRIFSGGDDYSSSLWDIPSATEIV-SYSEHSDYVRCGCASKLNgDVFITGSYDHTVKVFDARTKSSVMTIE--HGHPVESV 212
           ********************************.******************9**************************5..9******* PP
   S: 187  sfdsngkelvsgsldgtvklwdl 209
            + ++g  lvs+   ++vk+wd+
   Q: 213  LLFPSGGLLVSA-GGRYVKVWDV 234
           *99988666665.679******8 PP

Organism

Gallus gallus

Functional Description
(View)

Involved in nucleolar processing of pre-18S ribosomal RNA.

Protein Sequence
(Fasta)

MASYKPVVIP AVPKLGEKIT QDTLYWRGYK TPVQIKEFGA INKIDFSPVP PYNYAVTASS 60
RVHIYGRYSQ EPIKTFSRFK DAAYCATYRD DGKLLVAGSE EGSIRLFDIS GRAPLRQFDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATGTCCGC CGGCGTGCTG TCTGTCCGCG AGGCTGTGCG AGGGTAGCTA TGGCGGCGCG 60
GCGTGGCCTG CTCCTTGCGC TCTGAGGCGG CAGGCCGCGT TCCTCCGCAG CACCTCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

KEGG

gga:426152

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	69.47	0.00e+00	736.00
IUUC-Atr-003068	Amborella trichopoda	31.33	3.00e-67	249.00
IUUC-Apl-003926	Anas platyrhynchos	96.10	0.00e+00	946.00
IUUC-Aca-004271	Anolis carolinensis	74.85	0.00e+00	776.00
IUUC-Aly-005525	Arabidopsis lyrata	31.25	1.00e-63	237.00
IUUC-Ath-006954	Arabidopsis thaliana	32.23	2.00e-64	239.00
IUUC-Ago-007973	Ashbya gossypii	31.87	5.00e-65	241.00
IUUC-Acl-008287	Aspergillus clavatus	32.10	2.00e-56	213.00
IUUC-Afl-008504	Aspergillus flavus	31.84	1.00e-66	246.00
IUUC-Afu-008983	Aspergillus fumigatus	31.23	6.00e-51	194.00
IUUC-Ani-009315	Aspergillus nidulans	32.34	3.00e-60	225.00
IUUC-Ang-009690	Aspergillus niger	30.37	2.00e-62	233.00
IUUC-Aor-010181	Aspergillus oryzae	31.84	1.00e-66	246.00
IUUC-Ate-010498	Aspergillus terreus	29.86	4.00e-60	225.00
IUUC-Ame-011814	Astyanax mexicanus	61.80	0.00e+00	632.00
IUUC-Bgr-012273	Blumeria graminis	30.95	5.00e-71	261.00
IUUC-Bta-013068	Bos taurus	70.84	0.00e+00	741.00
IUUC-Bci-013930	Botrytis cinerea	31.95	2.00e-72	266.00
IUUC-Bdi-014876	Brachypodium distachyon	32.35	2.00e-70	259.00
IUUC-Bol-015366	Brassica oleracea	31.94	1.00e-66	246.00
IUUC-Bra-017589	Brassica rapa	31.47	4.00e-65	242.00
IUUC-Cel-018159	Caenorhabditis elegans	28.37	1.00e-60	227.00
IUUC-Cja-019139	Callithrix jacchus	71.84	0.00e+00	721.00
IUUC-Cfa-020742	Canis familiaris	68.43	0.00e+00	719.00
IUUC-Cpo-021707	Cavia porcellus	71.15	0.00e+00	737.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	39.66	9.00e-87	313.00
IUUC-Csa-023024	Chlorocebus sabaeus	70.59	0.00e+00	739.00
IUUC-Cho-024487	Choloepus hoffmanni	76.81	5.00e-122	431.00
IUUC-Cin-025294	Ciona intestinalis	45.34	3.00e-138	484.00
IUUC-Cgl-026388	Colletotrichum gloeosporioides	28.88	9.00e-43	167.00
IUUC-Cne-026945	Cryptococcus neoformans	35.84	3.00e-80	291.00
IUUC-Cme-027108	Cyanidioschyzon merolae	29.92	2.00e-55	209.00
IUUC-Dre-028316	Danio rerio	61.60	0.00e+00	640.00
IUUC-Dno-028985	Dasypus novemcinctus	69.61	0.00e+00	729.00
IUUC-Dor-030219	Dipodomys ordii	58.84	2.00e-120	425.00
IUUC-Dse-031495	Dothistroma septosporum	28.04	8.00e-45	174.00
IUUC-Dme-031769	Drosophila melanogaster	39.42	4.00e-84	305.00
IUUC-Ete-032630	Echinops telfairi	63.53	4.00e-171	594.00
IUUC-Eca-033816	Equus caballus	70.39	0.00e+00	738.00
IUUC-Eeu-034840	Erinaceus europaeus	61.36	5.00e-164	570.00
IUUC-Fca-035751	Felis catus	69.80	0.00e+00	742.00
IUUC-Fal-036733	Ficedula albicollis	86.19	0.00e+00	940.00
IUUC-Fox-037743	Fusarium oxysporum	29.84	3.00e-61	229.00
IUUC-Fso-038395	Fusarium solani	30.65	7.00e-63	234.00
IUUC-Gmo-038803	Gadus morhua	63.74	0.00e+00	655.00
IUUC-Ggr-040092	Gaeumannomyces graminis	29.60	7.00e-58	218.00
IUUC-Gac-042640	Gasterosteus aculeatus	61.88	0.00e+00	677.00
IUUC-Gma-044192	Glycine max	33.08	2.00e-74	273.00
IUUC-Ggo-045616	Gorilla gorilla	67.51	0.00e+00	729.00
IUUC-Hsa-046720	Homo sapiens	67.85	0.00e+00	695.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	70.02	0.00e+00	724.00
IUUC-Kpa-049291	Komagataella pastoris	29.80	2.00e-62	232.00
IUUC-Lch-049729	Latimeria chalumnae	73.36	0.00e+00	751.00
IUUC-Lpe-051141	Leersia perrieri	31.32	2.00e-71	262.00
IUUC-Loc-051756	Lepisosteus oculatus	72.60	0.00e+00	742.00
IUUC-Lma-053083	Leptosphaeria maculans	29.21	2.00e-59	223.00
IUUC-Laf-054067	Loxodonta africana	70.06	0.00e+00	712.00
IUUC-Mcc-055096	Macaca mulatta	70.59	0.00e+00	739.00
IUUC-Meu-056604	Macropus eugenii	67.45	0.00e+00	689.00
IUUC-Mor-057186	Magnaporthe oryzae	30.04	4.00e-64	238.00
IUUC-Mtr-058346	Medicago truncatula	32.25	9.00e-69	254.00
IUUC-Mla-059116	Melampsora laricipopulina	34.68	2.00e-79	290.00
IUUC-Mga-060038	Meleagris gallopavo	96.49	0.00e+00	761.00
IUUC-Mvi-060272	Microbotryum violaceum	30.83	5.00e-75	275.00
IUUC-Mmr-060877	Microcebus murinus	70.78	0.00e+00	741.00
IUUC-Mdo-062168	Monodelphis domestica	73.06	0.00e+00	736.00
IUUC-Mmu-063441	Mus musculus	68.00	0.00e+00	724.00
IUUC-Mac-065330	Musa acuminata	33.25	2.00e-56	213.00
IUUC-Mpu-065704	Mustela putorius furo	69.41	0.00e+00	740.00
IUUC-Mlu-067640	Myotis lucifugus	70.80	0.00e+00	732.00
IUUC-Nfi-068589	Neosartorya fischeri	31.78	3.00e-52	199.00
IUUC-Ncr-068769	Neurospora crassa	30.42	2.00e-59	223.00
IUUC-Nle-069105	Nomascus leucogenys	67.52	0.00e+00	677.00
IUUC-Opr-070203	Ochotona princeps	69.80	0.00e+00	768.00
IUUC-Ont-072054	Oreochromis niloticus	64.47	0.00e+00	689.00
IUUC-Oan-073624	Ornithorhynchus anatinus	72.36	0.00e+00	671.00
IUUC-Ocu-074326	Oryctolagus cuniculus	70.59	0.00e+00	734.00
IUUC-Obr-076038	Oryza brachyantha	33.70	6.00e-68	251.00
IUUC-Ogl-077463	Oryza glaberrima	31.96	5.00e-64	238.00
IUUC-Ogu-078631	Oryza glumaepatula	32.42	7.00e-71	261.00
IUUC-Oin-079242	Oryza indica	32.16	6.00e-65	241.00
IUUC-Olo-080652	Oryza longistaminata	30.80	4.00e-60	225.00
IUUC-Ome-081109	Oryza meridionalis	33.05	3.00e-62	233.00
IUUC-Oni-082187	Oryza nivara	32.16	6.00e-65	241.00
IUUC-Opu-083995	Oryza punctata	31.63	2.00e-63	236.00
IUUC-Oru-084962	Oryza rufipogon	33.41	6.00e-61	228.00
IUUC-Osa-086201	Oryza sativa	33.41	6.00e-61	228.00
IUUC-Ola-087115	Oryzias latipes	63.57	0.00e+00	693.00
IUUC-Olu-087842	Ostreococcus lucimarinus	34.05	1.00e-72	267.00
IUUC-Oga-088204	Otolemur garnettii	69.79	0.00e+00	737.00
IUUC-Oar-089297	Ovis aries	70.51	0.00e+00	733.00
IUUC-Ptr-090953	Pan troglodytes	70.59	0.00e+00	737.00
IUUC-Pan-092451	Papio anubis	67.32	0.00e+00	720.00
IUUC-Psi-092999	Pelodiscus sinensis	81.70	0.00e+00	867.00
IUUC-Pma-094304	Petromyzon marinus	46.00	4.00e-133	468.00
IUUC-Pno-095060	Phaeosphaeria nodorum	31.01	6.00e-60	224.00
IUUC-Ppa-095433	Physcomitrella patens	37.16	3.00e-95	342.00
IUUC-Pfo-096433	Poecilia formosa	63.32	0.00e+00	671.00
IUUC-Pab-098677	Pongo abelii	70.39	0.00e+00	739.00
IUUC-Pop-099329	Populus trichocarpa	32.17	4.00e-64	238.00
IUUC-Pca-100444	Procavia capensis	65.10	3.00e-177	614.00
IUUC-Ppe-101318	Prunus persica	31.67	1.00e-78	287.00
IUUC-Pva-102162	Pteropus vampyrus	61.18	0.00e+00	657.00
IUUC-Pgr-103329	Puccinia graminis	31.90	3.00e-74	272.00
IUUC-Ptt-103837	Puccinia triticina	31.30	4.00e-73	268.00
IUUC-Pte-104133	Pyrenophora teres	29.42	4.00e-59	222.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	29.42	7.00e-59	221.00
IUUC-Rno-105004	Rattus norvegicus	71.52	0.00e+00	727.00
IUUC-Sce-106443	Saccharomyces cerevisiae	30.50	2.00e-63	236.00
IUUC-Sha-107199	Sarcophilus harrisii	73.03	0.00e+00	784.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	37.87	1.00e-95	343.00
IUUC-Spo-108125	Schizosaccharomyces pombe	38.18	4.00e-92	331.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	32.14	6.00e-72	265.00
IUUC-Smo-109588	Selaginella moellendorffii	36.83	1.00e-92	333.00
IUUC-Sit-110043	Setaria italica	31.51	3.00e-52	199.00
IUUC-Stu-112396	Solanum tuberosum	35.32	1.00e-88	320.00
IUUC-Sar-113359	Sorex araneus	67.83	7.00e-118	416.00
IUUC-Sre-114995	Sporisorium reilianum	33.89	2.00e-79	289.00
IUUC-Ssc-115397	Sus scrofa	70.39	0.00e+00	742.00
IUUC-Tgu-116834	Taeniopygia guttata	86.85	0.00e+00	947.00
IUUC-Tru-118764	Takifugu rubripes	63.40	0.00e+00	682.00
IUUC-Tsy-119118	Tarsius syrichta	70.20	0.00e+00	738.00
IUUC-Tni-120053	Tetraodon nigroviridis	63.94	0.00e+00	697.00
IUUC-Tca-121842	Theobroma cacao	32.81	9.00e-73	267.00
IUUC-Tre-122172	Trichoderma reesei	31.43	2.00e-66	246.00
IUUC-Tvi-122288	Trichoderma virens	30.80	7.00e-54	204.00
IUUC-Tae-124909	Triticum aestivum	32.29	3.00e-56	213.00
IUUC-Tur-126846	Triticum urartu	29.79	2.00e-31	129.00
IUUC-Tme-127164	Tuber melanosporum	31.25	5.00e-69	254.00
IUUC-Tbe-127458	Tupaia belangeri	70.00	0.00e+00	695.00
IUUC-Ttr-128680	Tursiops truncatus	70.65	0.00e+00	711.00
IUUC-Uma-129508	Ustilago maydis	33.33	4.00e-77	281.00
IUUC-Vda-129696	Verticillium dahliae	35.41	8.00e-50	191.00
IUUC-Vpa-130820	Vicugna pacos	70.33	0.00e+00	738.00
IUUC-Vvi-131126	Vitis vinifera	33.81	2.00e-86	313.00
IUUC-Xtr-131826	Xenopus tropicalis	69.72	0.00e+00	759.00
IUUC-Xma-133373	Xiphophorus maculatus	64.66	0.00e+00	687.00
IUUC-Yli-134432	Yarrowia lipolytica	30.91	7.00e-74	271.00
IUUC-Zma-135241	Zea mays	31.30	3.00e-64	239.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence