iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134424

Ensembl Protein ID

CAG79804

UniProt Accession

Q6C553; HIR1_YARLI

Genbank Protein ID

CAG79804.2

Protein Name

Protein HIR1

Genbank Nucleotide ID

CR382131

Gene Name

HIR1; YALI0E20933g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_E20933g	CAG79804	CAG79804

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-25	85.4	82	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           +H++ vt ++f +d ++l++GsdD ++ vW+
   Q: 82   THNGAVTVVRFsPDgRYLATGSDDRVVLVWE 112
           59**********999***************8 PP

Organism

Yarrowia lipolytica

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MYIVKPSWLC HSDDQKKFEV YSVTVSPDNQ RVATGGQDGK VRIWSAQSIR DSAKGDNESS 60
DTPSNLSGAP APGAKQLCSM ATHNGAVTVV RFSPDGRYLA TGSDDRVVLV WERDSTKVPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACATTG TAAAGCCCTC GTGGCTTTGT CATTCCGGTG AGTAGCAACT CTTCAGTTTC 60
GTGACACACA CATTTCCACA CGACTAACCC AGATGACCAG AAAAAATTCG AGGTGTACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000417--C:HIR complex
GO:0000790--C:nuclear chromatin
GO:0031491--F:nucleosome binding
GO:0003714--F:transcription corepressor activity
GO:0016569--P:covalent chromatin modification
GO:0006336--P:DNA replication-independent nucleosome assembly
GO:0031935--P:regulation of chromatin silencing
GO:0006351--P:transcription, DNA-templated

KEGG

yli:YALI0E20933g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	33.47	2.00e-65	241.00
IUUC-Aml-001723	Ailuropoda melanoleuca	31.34	6.00e-61	227.00
IUUC-Atr-003132	Amborella trichopoda	34.84	2.00e-66	245.00
IUUC-Apl-003197	Anas platyrhynchos	31.10	8.00e-59	220.00
IUUC-Aca-004733	Anolis carolinensis	29.67	5.00e-63	234.00
IUUC-Aly-005446	Arabidopsis lyrata	30.93	4.00e-59	221.00
IUUC-Ath-007627	Arabidopsis thaliana	31.48	7.00e-63	233.00
IUUC-Ago-007766	Ashbya gossypii	36.10	5.00e-142	496.00
IUUC-Acl-008104	Aspergillus clavatus	41.65	0.00e+00	780.00
IUUC-Afl-008591	Aspergillus flavus	40.86	0.00e+00	762.00
IUUC-Afu-008781	Aspergillus fumigatus	41.55	0.00e+00	736.00
IUUC-Ani-009272	Aspergillus nidulans	40.22	0.00e+00	690.00
IUUC-Ang-009655	Aspergillus niger	42.22	0.00e+00	770.00
IUUC-Aor-010119	Aspergillus oryzae	41.13	0.00e+00	763.00
IUUC-Ate-010530	Aspergillus terreus	38.59	0.00e+00	701.00
IUUC-Bgr-012237	Blumeria graminis	39.15	0.00e+00	686.00
IUUC-Bta-013320	Bos taurus	31.10	2.00e-60	225.00
IUUC-Bci-013795	Botrytis cinerea	39.40	0.00e+00	746.00
IUUC-Bdi-014075	Brachypodium distachyon	35.29	2.00e-69	255.00
IUUC-Bol-016440	Brassica oleracea	28.61	3.00e-92	331.00
IUUC-Bra-016651	Brassica rapa	33.27	3.00e-68	251.00
IUUC-Cel-018692	Caenorhabditis elegans	24.29	3.00e-32	131.00
IUUC-Cja-018987	Callithrix jacchus	31.67	5.00e-55	207.00
IUUC-Cfa-020132	Canis familiaris	31.34	6.00e-61	227.00
IUUC-Cpo-021484	Cavia porcellus	31.12	2.00e-63	235.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	28.54	2.00e-47	182.00
IUUC-Csa-023081	Chlorocebus sabaeus	31.12	3.00e-63	234.00
IUUC-Cin-025182	Ciona intestinalis	30.41	1.00e-58	219.00
IUUC-Csv-026154	Ciona savignyi	31.06	3.00e-56	211.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	39.12	0.00e+00	726.00
IUUC-Cne-026891	Cryptococcus neoformans	38.30	4.00e-83	300.00
IUUC-Cme-027349	Cyanidioschyzon merolae	28.66	1.00e-39	156.00
IUUC-Dre-027655	Danio rerio	30.00	1.00e-60	226.00
IUUC-Dno-029557	Dasypus novemcinctus	31.43	2.00e-52	199.00
IUUC-Dor-030687	Dipodomys ordii	26.90	4.00e-47	181.00
IUUC-Dse-031334	Dothistroma septosporum	40.39	0.00e+00	716.00
IUUC-Dme-031746	Drosophila melanogaster	31.88	3.00e-62	231.00
IUUC-Ete-032384	Echinops telfairi	26.30	1.00e-42	166.00
IUUC-Eca-033430	Equus caballus	31.10	2.00e-60	225.00
IUUC-Fca-036121	Felis catus	31.34	7.00e-61	227.00
IUUC-Fal-036817	Ficedula albicollis	31.10	7.00e-59	220.00
IUUC-Fox-037906	Fusarium oxysporum	45.72	3.00e-153	533.00
IUUC-Fso-038409	Fusarium solani	40.50	0.00e+00	739.00
IUUC-Gmo-039151	Gadus morhua	31.50	8.00e-63	233.00
IUUC-Ggr-040016	Gaeumannomyces graminis	40.05	0.00e+00	736.00
IUUC-Gga-040936	Gallus gallus	30.89	3.00e-61	228.00
IUUC-Gac-041405	Gasterosteus aculeatus	30.94	1.00e-60	226.00
IUUC-Gma-042800	Glycine max	34.91	8.00e-67	246.00
IUUC-Ggo-045430	Gorilla gorilla	31.12	6.00e-63	234.00
IUUC-Hsa-046442	Homo sapiens	31.12	5.00e-63	234.00
IUUC-Hvu-047587	Hordeum vulgare	35.81	4.00e-60	224.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	34.19	5.00e-46	176.00
IUUC-Kpa-049145	Komagataella pastoris	36.98	8.00e-159	552.00
IUUC-Lch-050474	Latimeria chalumnae	31.15	1.00e-59	223.00
IUUC-Lpe-051209	Leersia perrieri	33.41	2.00e-60	225.00
IUUC-Loc-052119	Lepisosteus oculatus	29.18	2.00e-58	218.00
IUUC-Lma-053237	Leptosphaeria maculans	38.31	0.00e+00	719.00
IUUC-Laf-053718	Loxodonta africana	30.66	6.00e-63	233.00
IUUC-Mcc-055621	Macaca mulatta	31.94	6.00e-56	210.00
IUUC-Meu-055914	Macropus eugenii	31.14	3.00e-40	158.00
IUUC-Mor-057090	Magnaporthe oryzae	52.14	2.00e-136	478.00
IUUC-Mpo-057364	Magnaporthe poae	41.18	0.00e+00	748.00
IUUC-Mtr-058691	Medicago truncatula	27.70	6.00e-86	310.00
IUUC-Mla-058914	Melampsora laricipopulina	29.76	3.00e-90	324.00
IUUC-Mga-060181	Meleagris gallopavo	30.14	8.00e-59	220.00
IUUC-Mvi-060432	Microbotryum violaceum	33.73	7.00e-68	250.00
IUUC-Mmr-060871	Microcebus murinus	31.12	6.00e-63	234.00
IUUC-Mdo-062301	Monodelphis domestica	31.12	2.00e-61	228.00
IUUC-Mmu-063888	Mus musculus	30.89	8.00e-63	233.00
IUUC-Mac-065137	Musa acuminata	33.41	6.00e-61	227.00
IUUC-Mpu-066732	Mustela putorius furo	31.34	7.00e-61	227.00
IUUC-Mlu-067542	Myotis lucifugus	31.10	3.00e-60	224.00
IUUC-Nfi-068396	Neosartorya fischeri	41.36	0.00e+00	736.00
IUUC-Ncr-068842	Neurospora crassa	39.65	0.00e+00	730.00
IUUC-Nle-070156	Nomascus leucogenys	31.12	5.00e-63	234.00
IUUC-Opr-070808	Ochotona princeps	29.27	7.00e-38	150.00
IUUC-Ont-072105	Oreochromis niloticus	30.33	3.00e-59	221.00
IUUC-Ocu-074962	Oryctolagus cuniculus	31.34	5.00e-61	227.00
IUUC-Oba-075178	Oryza barthii	36.20	1.00e-68	252.00
IUUC-Obr-076399	Oryza brachyantha	35.75	3.00e-68	251.00
IUUC-Ogu-078797	Oryza glumaepatula	36.20	1.00e-68	252.00
IUUC-Oin-080085	Oryza indica	35.55	4.00e-58	218.00
IUUC-Olo-081048	Oryza longistaminata	35.40	2.00e-49	189.00
IUUC-Ome-081324	Oryza meridionalis	36.20	2.00e-68	251.00
IUUC-Oni-082548	Oryza nivara	36.20	1.00e-68	252.00
IUUC-Opu-084008	Oryza punctata	36.06	6.00e-69	253.00
IUUC-Oru-084339	Oryza rufipogon	35.97	5.00e-68	250.00
IUUC-Osa-085782	Oryza sativa	35.97	5.00e-68	250.00
IUUC-Ola-087302	Oryzias latipes	28.54	5.00e-57	214.00
IUUC-Olu-087611	Ostreococcus lucimarinus	31.77	3.00e-59	221.00
IUUC-Oga-087935	Otolemur garnettii	31.34	1.00e-60	226.00
IUUC-Oar-089229	Ovis aries	27.52	1.00e-50	193.00
IUUC-Ptr-090715	Pan troglodytes	31.12	6.00e-63	234.00
IUUC-Pan-092318	Papio anubis	31.34	5.00e-61	227.00
IUUC-Psi-094053	Pelodiscus sinensis	31.50	4.00e-58	218.00
IUUC-Pno-094985	Phaeosphaeria nodorum	35.42	2.00e-173	600.00
IUUC-Ppa-095819	Physcomitrella patens	34.01	2.00e-66	245.00
IUUC-Pfo-096857	Poecilia formosa	31.75	3.00e-58	218.00
IUUC-Pab-098047	Pongo abelii	31.12	5.00e-63	234.00
IUUC-Pop-099865	Populus trichocarpa	36.00	1.00e-66	246.00
IUUC-Pca-100558	Procavia capensis	33.63	5.00e-35	140.00
IUUC-Ppe-101261	Prunus persica	35.51	5.00e-67	247.00
IUUC-Pva-102683	Pteropus vampyrus	31.34	4.00e-61	227.00
IUUC-Pgr-103660	Puccinia graminis	39.11	4.00e-75	274.00
IUUC-Ptt-103900	Puccinia triticina	39.11	5.00e-76	276.00
IUUC-Pte-104209	Pyrenophora teres	38.17	0.00e+00	741.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	38.11	0.00e+00	732.00
IUUC-Rno-105566	Rattus norvegicus	31.12	3.00e-63	235.00
IUUC-Sce-106291	Saccharomyces cerevisiae	36.09	6.00e-149	519.00
IUUC-Sha-107514	Sarcophilus harrisii	29.05	2.00e-48	185.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	36.85	0.00e+00	629.00
IUUC-Spo-108162	Schizosaccharomyces pombe	38.02	2.00e-175	607.00
IUUC-Ssl-108629	Sclerotinia sclerotiorum	32.42	2.00e-104	371.00
IUUC-Smo-109186	Selaginella moellendorffii	35.11	9.00e-72	263.00
IUUC-Sit-110730	Setaria italica	35.83	4.00e-69	254.00
IUUC-Sly-111547	Solanum lycopersicum	34.83	2.00e-64	239.00
IUUC-Stu-112705	Solanum tuberosum	34.83	1.00e-64	239.00
IUUC-Sar-113222	Sorex araneus	29.50	1.00e-54	206.00
IUUC-Sbi-114528	Sorghum bicolor	33.40	3.00e-71	261.00
IUUC-Sre-115061	Sporisorium reilianum	32.78	4.00e-79	287.00
IUUC-Ssc-116364	Sus scrofa	31.10	3.00e-60	225.00
IUUC-Tgu-116645	Taeniopygia guttata	31.10	9.00e-59	219.00
IUUC-Tru-117590	Takifugu rubripes	31.43	1.00e-61	229.00
IUUC-Tsy-119212	Tarsius syrichta	30.85	6.00e-50	190.00
IUUC-Tni-119915	Tetraodon nigroviridis	31.43	2.00e-61	229.00
IUUC-Tca-121765	Theobroma cacao	34.69	6.00e-67	247.00
IUUC-Tre-121887	Trichoderma reesei	38.83	0.00e+00	704.00
IUUC-Tvi-122262	Trichoderma virens	40.72	0.00e+00	716.00
IUUC-Tur-126483	Triticum urartu	35.97	2.00e-70	259.00
IUUC-Tme-127202	Tuber melanosporum	40.80	0.00e+00	707.00
IUUC-Tbe-127350	Tupaia belangeri	27.85	2.00e-31	129.00
IUUC-Ttr-129077	Tursiops truncatus	28.47	9.00e-48	183.00
IUUC-Uma-129465	Ustilago maydis	30.39	2.00e-78	285.00
IUUC-Vda-129844	Verticillium dahliae	40.69	2.00e-157	547.00
IUUC-Vvi-131397	Vitis vinifera	34.75	2.00e-65	242.00
IUUC-Xtr-132057	Xenopus tropicalis	28.75	1.00e-61	229.00
IUUC-Xma-134139	Xiphophorus maculatus	31.78	5.00e-51	193.00
IUUC-Zma-135839	Zea mays	35.52	6.00e-69	253.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence