iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099730

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_227530; POPTR_0010s21320g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s21320	POPTR_0010s21320.1	POPTR_0010s21320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.4	53	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f++g  +++lp C H +h +C+ +w         + +CP Cr
   Q: 53   CAICLSEFEEGeeLRTLPeCLHSYHVECIDMW------LHSHTNCPMCR 95
           ********55444*******************......999*******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRRFRATTTQ QRPRRYGIET MATQSSIENS TAQLIPAYKF QKGMGLVGDD GTCAICLSEF 60
EEGEELRTLP ECLHSYHVEC IDMWLHSHTN CPMCRTDTTP SPGVYLSARD LDSERPSVVY 120

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Nucleotide Sequence
(Fasta)

GTGATGATAT TAACTCTAAA ATTGCCGTTC TTCTGATTGG CGTTGGGTCT GCAGCTCTTG 60
TTATCGCACT CTACCATTGT ATTGCCATGC GCCGGTTCAG GGCTACGACT ACTCAGCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s21320g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003061	Amborella trichopoda	60.81	3.00e-24	103.00
IUUC-Mtr-057986	Medicago truncatula	51.69	4.00e-29	119.00
IUUC-Olu-087679	Ostreococcus lucimarinus	46.03	2.00e-11	63.90
IUUC-Ppe-101780	Prunus persica	57.63	6.00e-33	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence