iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131585

UUCD1 version

UUC-ViV-00940

Ensembl Protein ID

VIT_16s0013g01550.t01

UniProt Accession

F6I2S4; F6I2S4_VITVI

Genbank Protein ID

CCB61241.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596738

Gene Name

MSI1; VIT_16s0013g01550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0013g01550	VIT_16s0013g01550.t01	VIT_16s0013g01550.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-30	104.4	272	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 272  HQSEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 305
           9**********977799**************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGKDEEEMRG EIEERLINEE YKIWKKNTPF LYDLVITHAL EWPSLTVEWL PDREEPPGKD 60
YSVQKMILGT HTSENEPNYL MLAQVQLPLE DAENDARQYD DDRFDVGGFG CANGKVQIIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGATTTCT CTCATCAGGT CTGTAAATCT CATTCAATTT TAGGGTTTTG GAAATTGGTC 60
CGGGAAGGTG AAAGGAAGGG TTTTTGTGTT TGGTTTTTGA ATTTTCCATG TTTTGTGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

vvi:100247592

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	79.66	0.00e+00	676.00
IUUC-Aml-001339	Ailuropoda melanoleuca	66.50	3.00e-159	553.00
IUUC-Atr-003075	Amborella trichopoda	90.33	0.00e+00	794.00
IUUC-Apl-003952	Anas platyrhynchos	67.25	2.00e-163	567.00
IUUC-Aca-004508	Anolis carolinensis	67.25	2.00e-163	568.00
IUUC-Aly-006342	Arabidopsis lyrata	91.78	0.00e+00	800.00
IUUC-Ath-006855	Arabidopsis thaliana	92.22	0.00e+00	804.00
IUUC-Ago-007892	Ashbya gossypii	36.25	5.00e-70	257.00
IUUC-Acl-008163	Aspergillus clavatus	48.77	8.00e-115	406.00
IUUC-Afl-008645	Aspergillus flavus	49.03	2.00e-116	411.00
IUUC-Afu-009091	Aspergillus fumigatus	48.04	3.00e-112	397.00
IUUC-Ani-009478	Aspergillus nidulans	44.96	6.00e-96	343.00
IUUC-Ang-009707	Aspergillus niger	48.53	1.00e-112	398.00
IUUC-Aor-010028	Aspergillus oryzae	49.03	2.00e-116	411.00
IUUC-Ate-010416	Aspergillus terreus	49.02	8.00e-117	412.00
IUUC-Ame-010598	Astyanax mexicanus	66.75	8.00e-162	562.00
IUUC-Bgr-012001	Blumeria graminis	43.69	4.00e-95	340.00
IUUC-Bta-012851	Bos taurus	67.25	1.00e-163	568.00
IUUC-Bci-013815	Botrytis cinerea	46.25	3.00e-112	397.00
IUUC-Bdi-014926	Brachypodium distachyon	87.80	0.00e+00	767.00
IUUC-Bol-015856	Brassica oleracea	89.25	0.00e+00	785.00
IUUC-Bra-016725	Brassica rapa	80.99	0.00e+00	731.00
IUUC-Cel-018587	Caenorhabditis elegans	60.95	1.00e-144	504.00
IUUC-Cja-019884	Callithrix jacchus	67.25	1.00e-163	568.00
IUUC-Cfa-020343	Canis familiaris	67.25	1.00e-163	568.00
IUUC-Cpo-021591	Cavia porcellus	67.25	1.00e-163	568.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	69.71	8.00e-175	605.00
IUUC-Csa-023738	Chlorocebus sabaeus	66.00	2.00e-159	554.00
IUUC-Cho-024506	Choloepus hoffmanni	67.00	4.00e-162	563.00
IUUC-Cin-025589	Ciona intestinalis	63.53	6.00e-161	559.00
IUUC-Csv-026216	Ciona savignyi	62.59	2.00e-159	554.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	45.41	4.00e-106	377.00
IUUC-Cne-026792	Cryptococcus neoformans	50.13	2.00e-124	437.00
IUUC-Cme-027307	Cyanidioschyzon merolae	49.88	1.00e-120	425.00
IUUC-Dre-028742	Danio rerio	66.50	2.00e-161	560.00
IUUC-Dno-029114	Dasypus novemcinctus	67.25	1.00e-163	568.00
IUUC-Dor-030733	Dipodomys ordii	57.00	7.00e-130	456.00
IUUC-Dse-031282	Dothistroma septosporum	44.82	8.00e-98	350.00
IUUC-Dme-032126	Drosophila melanogaster	65.85	2.00e-162	564.00
IUUC-Ete-032731	Echinops telfairi	67.25	1.00e-163	568.00
IUUC-Eca-033533	Equus caballus	66.00	1.00e-158	551.00
IUUC-Eeu-034644	Erinaceus europaeus	61.43	2.00e-77	282.00
IUUC-Fca-036202	Felis catus	67.25	1.00e-163	568.00
IUUC-Fal-037084	Ficedula albicollis	67.25	2.00e-163	567.00
IUUC-Fox-037974	Fusarium oxysporum	47.10	1.00e-111	395.00
IUUC-Fso-038246	Fusarium solani	45.64	3.00e-100	357.00
IUUC-Gmo-039214	Gadus morhua	66.83	3.00e-161	560.00
IUUC-Ggr-039741	Gaeumannomyces graminis	47.70	2.00e-107	381.00
IUUC-Gga-040396	Gallus gallus	67.25	1.00e-163	568.00
IUUC-Gac-041389	Gasterosteus aculeatus	66.83	2.00e-161	560.00
IUUC-Gma-042791	Glycine max	93.40	0.00e+00	805.00
IUUC-Ggo-045422	Gorilla gorilla	62.47	1.00e-143	501.00
IUUC-Hsa-045683	Homo sapiens	67.25	1.00e-163	568.00
IUUC-Hvu-047457	Hordeum vulgare	90.95	5.00e-110	388.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	67.25	1.00e-163	568.00
IUUC-Kpa-049119	Komagataella pastoris	36.76	2.00e-70	258.00
IUUC-Lch-050545	Latimeria chalumnae	66.58	1.00e-163	568.00
IUUC-Lpe-051337	Leersia perrieri	87.53	0.00e+00	763.00
IUUC-Loc-052473	Lepisosteus oculatus	66.50	5.00e-162	563.00
IUUC-Lma-053275	Leptosphaeria maculans	42.86	4.00e-65	240.00
IUUC-Laf-054114	Loxodonta africana	67.25	1.00e-163	568.00
IUUC-Mcc-055648	Macaca mulatta	67.25	1.00e-163	568.00
IUUC-Meu-056490	Macropus eugenii	67.25	1.00e-163	568.00
IUUC-Mor-056947	Magnaporthe oryzae	47.34	2.00e-105	374.00
IUUC-Mpo-057602	Magnaporthe poae	47.83	2.00e-107	382.00
IUUC-Mtr-057853	Medicago truncatula	90.82	0.00e+00	781.00
IUUC-Mla-058884	Melampsora laricipopulina	50.64	9.00e-121	426.00
IUUC-Mga-059452	Meleagris gallopavo	67.25	1.00e-163	568.00
IUUC-Mvi-060450	Microbotryum violaceum	55.09	1.00e-128	452.00
IUUC-Mmr-061008	Microcebus murinus	66.00	4.00e-159	553.00
IUUC-Mdo-062817	Monodelphis domestica	67.00	4.00e-162	563.00
IUUC-Mmu-063282	Mus musculus	67.25	1.00e-163	568.00
IUUC-Mac-065480	Musa acuminata	89.15	0.00e+00	778.00
IUUC-Mpu-066529	Mustela putorius furo	66.75	3.00e-162	563.00
IUUC-Mlu-068072	Myotis lucifugus	67.25	1.00e-163	568.00
IUUC-Nfi-068374	Neosartorya fischeri	48.04	4.00e-110	390.00
IUUC-Ncr-068794	Neurospora crassa	44.95	5.00e-106	377.00
IUUC-Nle-069577	Nomascus leucogenys	67.25	1.00e-163	568.00
IUUC-Opr-070245	Ochotona princeps	55.00	7.00e-124	436.00
IUUC-Ont-071809	Oreochromis niloticus	66.75	8.00e-162	562.00
IUUC-Oan-072839	Ornithorhynchus anatinus	67.08	3.00e-162	563.00
IUUC-Ocu-074778	Oryctolagus cuniculus	66.00	1.00e-159	555.00
IUUC-Oba-075719	Oryza barthii	75.78	0.00e+00	656.00
IUUC-Obr-076859	Oryza brachyantha	87.80	0.00e+00	763.00
IUUC-Ogl-077920	Oryza glaberrima	88.02	0.00e+00	766.00
IUUC-Ogu-078048	Oryza glumaepatula	75.54	0.00e+00	652.00
IUUC-Oin-079960	Oryza indica	72.88	4.00e-178	616.00
IUUC-Olo-080553	Oryza longistaminata	72.41	0.00e+00	639.00
IUUC-Ome-081835	Oryza meridionalis	88.02	0.00e+00	770.00
IUUC-Oni-082494	Oryza nivara	75.54	0.00e+00	650.00
IUUC-Opu-083913	Oryza punctata	84.35	0.00e+00	719.00
IUUC-Oru-084666	Oryza rufipogon	88.02	0.00e+00	766.00
IUUC-Osa-085884	Oryza sativa	88.02	0.00e+00	766.00
IUUC-Ola-086664	Oryzias latipes	66.75	8.00e-162	562.00
IUUC-Olu-087579	Ostreococcus lucimarinus	69.47	6.00e-164	569.00
IUUC-Oga-088364	Otolemur garnettii	63.18	1.00e-149	521.00
IUUC-Oar-089652	Ovis aries	67.25	1.00e-163	568.00
IUUC-Ptr-091598	Pan troglodytes	66.00	2.00e-159	554.00
IUUC-Pan-092412	Papio anubis	66.00	2.00e-159	554.00
IUUC-Psi-093300	Pelodiscus sinensis	65.70	2.00e-150	524.00
IUUC-Pma-094307	Petromyzon marinus	65.59	3.00e-162	563.00
IUUC-Pno-095153	Phaeosphaeria nodorum	44.78	4.00e-99	353.00
IUUC-Ppa-095800	Physcomitrella patens	77.83	0.00e+00	677.00
IUUC-Pfo-097376	Poecilia formosa	66.58	2.00e-160	557.00
IUUC-Pab-097697	Pongo abelii	67.25	1.00e-163	568.00
IUUC-Pop-099709	Populus trichocarpa	93.16	0.00e+00	816.00
IUUC-Pca-100642	Procavia capensis	59.08	9.00e-136	475.00
IUUC-Ppe-101212	Prunus persica	96.65	0.00e+00	825.00
IUUC-Pva-102253	Pteropus vampyrus	67.25	1.00e-163	568.00
IUUC-Pgr-103441	Puccinia graminis	49.87	4.00e-116	410.00
IUUC-Pte-104332	Pyrenophora teres	44.47	2.00e-100	358.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	44.47	2.00e-100	358.00
IUUC-Rno-105678	Rattus norvegicus	67.25	1.00e-163	568.00
IUUC-Sce-106364	Saccharomyces cerevisiae	35.97	1.00e-66	245.00
IUUC-Sha-106663	Sarcophilus harrisii	67.25	2.00e-163	567.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	47.77	4.00e-105	374.00
IUUC-Spo-108145	Schizosaccharomyces pombe	47.62	9.00e-107	379.00
IUUC-Smo-109159	Selaginella moellendorffii	77.18	0.00e+00	677.00
IUUC-Sit-110144	Setaria italica	88.32	0.00e+00	740.00
IUUC-Sly-111680	Solanum lycopersicum	94.56	0.00e+00	820.00
IUUC-Stu-111931	Solanum tuberosum	95.85	0.00e+00	806.00
IUUC-Sar-113236	Sorex araneus	59.75	3.00e-136	477.00
IUUC-Sbi-114637	Sorghum bicolor	87.59	0.00e+00	763.00
IUUC-Sre-114980	Sporisorium reilianum	51.73	1.00e-130	458.00
IUUC-Ssc-116352	Sus scrofa	65.75	3.00e-159	553.00
IUUC-Tgu-116925	Taeniopygia guttata	67.00	2.00e-163	567.00
IUUC-Tru-117549	Takifugu rubripes	66.42	3.00e-159	553.00
IUUC-Tsy-118854	Tarsius syrichta	66.00	3.00e-159	553.00
IUUC-Tni-120398	Tetraodon nigroviridis	66.67	1.00e-161	561.00
IUUC-Tca-121841	Theobroma cacao	94.81	0.00e+00	823.00
IUUC-Tre-122190	Trichoderma reesei	47.33	4.00e-103	367.00
IUUC-Tvi-122304	Trichoderma virens	47.09	8.00e-112	395.00
IUUC-Tae-124648	Triticum aestivum	88.29	0.00e+00	744.00
IUUC-Tur-126850	Triticum urartu	78.79	1.00e-169	588.00
IUUC-Tme-126949	Tuber melanosporum	49.38	3.00e-117	414.00
IUUC-Tbe-128010	Tupaia belangeri	59.50	2.00e-135	474.00
IUUC-Ttr-128558	Tursiops truncatus	60.00	1.00e-138	485.00
IUUC-Uma-129424	Ustilago maydis	52.23	8.00e-133	466.00
IUUC-Vda-129873	Verticillium dahliae	45.93	9.00e-110	389.00
IUUC-Vpa-130079	Vicugna pacos	66.75	7.00e-162	562.00
IUUC-Xtr-132005	Xenopus tropicalis	66.83	4.00e-163	566.00
IUUC-Xma-133066	Xiphophorus maculatus	66.75	8.00e-162	562.00
IUUC-Yli-134334	Yarrowia lipolytica	37.17	7.00e-79	286.00
IUUC-Zma-135873	Zea mays	87.83	0.00e+00	741.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence