iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121271

Ensembl Protein ID

EOY11209

UniProt Accession

A0A061F9Q6; A0A061F9Q6_THECC

Genbank Protein ID

EOY11209.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

CM001883

Gene Name

TCM_026456

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_026456	EOY11209	EOY11209
TCM_026456	EOY11210	EOY11210

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.40e-09	37.7	208	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++ + ++  ++ C++  C+  ewfH+aC++l+  e++ +  kw+Cp Cr
   Q: 208  TYC-VCHQVSFGD--MIACDNenCQggEWFHYACVGLT-PETRFKG-KWYCPTCR 257
           69*.********9..*****999*999***********.4444444.4******8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYASTL PAELQRLLNT IRELDERSQS MINHTRQQTK YCLGLAAKRG 60
NGNSYFNNSH EDEDTIEKMR KDIEASQENA LSLCTEKVLL ARQAYDLIDS HVKRLDEDLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCTAAAA CGACCTCGTT TTTTTCTTCC CCTTCGTCTT TAATCCCCAG CAGAAAACCT 60
AGAACGGGAA AAAAAAATTA AATTCGCTAG ATCTTCCAAA TCAAAACCCT AGAACCCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	75.58	1.00e-102	364.00
IUUC-Ath-006578	Arabidopsis thaliana	82.95	7.00e-110	389.00
IUUC-Bdi-014508	Brachypodium distachyon	66.80	1.00e-98	351.00
IUUC-Bol-015751	Brassica oleracea	82.44	1.00e-123	434.00
IUUC-Bra-017962	Brassica rapa	80.75	4.00e-120	423.00
IUUC-Gma-044224	Glycine max	81.65	9.00e-119	418.00
IUUC-Hvu-047275	Hordeum vulgare	66.28	8.00e-97	345.00
IUUC-Lpe-051512	Leersia perrieri	64.86	4.00e-97	347.00
IUUC-Mtr-058288	Medicago truncatula	82.02	4.00e-123	432.00
IUUC-Mac-065671	Musa acuminata	72.48	2.00e-103	367.00
IUUC-Obr-076822	Oryza brachyantha	69.11	6.00e-100	355.00
IUUC-Ogl-077432	Oryza glaberrima	67.95	7.00e-98	348.00
IUUC-Osa-085802	Oryza sativa	67.95	7.00e-98	348.00
IUUC-Olu-087851	Ostreococcus lucimarinus	64.15	1.00e-17	82.00
IUUC-Ppa-096009	Physcomitrella patens	59.77	1.00e-84	305.00
IUUC-Pop-099544	Populus trichocarpa	81.11	6.00e-112	395.00
IUUC-Ppe-101698	Prunus persica	86.09	2.00e-103	367.00
IUUC-Smo-108678	Selaginella moellendorffii	60.23	3.00e-83	300.00
IUUC-Sit-110189	Setaria italica	67.95	3.00e-91	327.00
IUUC-Sly-111209	Solanum lycopersicum	79.62	1.00e-106	377.00
IUUC-Stu-112762	Solanum tuberosum	80.00	4.00e-107	379.00
IUUC-Sbi-114379	Sorghum bicolor	66.80	5.00e-99	352.00
IUUC-Tae-122798	Triticum aestivum	66.67	3.00e-97	347.00
IUUC-Vvi-131583	Vitis vinifera	86.21	2.00e-123	433.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence