iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d034006	Zm00001d034006_T001	Zm00001d034006_T001
Zm00001d034006	Zm00001d034006_T002	Zm00001d034006_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.80e-08	36.5	231	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C++ + ++  ++ C++  C   ewfH++C++l+  e++ +  kw+Cp Cr+
   Q: 231  TYC-ICHQISYGD--MIACDNenCGggEWFHYTCVGLT-PETRFKG-KWFCPTCRN 281
           69*.********9..*****9999888***********.4444444.4******85 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYSSTL AGDLQRILST MRELDDRAHG DDFFPISVFL MFAYLVLPQS 60
PKKCNFKSCP SIMGQTKEQI KYILGVSSHG YDRSNMDDDE SERMKKDIEA SQDNALNLCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACTAATTT GGTGATCGGG GATCCCTAGG GGAAGAAATC CTCTTACTTT TCAAAATTGA 60
ATTGGAAGGG ATTCCTCCCC CATGGATCCC CTTGGGATAC CTAATCACCA AATCAGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	60.99	5.00e-84	303.00
IUUC-Ath-006578	Arabidopsis thaliana	58.42	5.00e-83	300.00
IUUC-Bdi-014508	Brachypodium distachyon	75.52	1.00e-116	411.00
IUUC-Bol-015751	Brassica oleracea	58.48	3.00e-86	310.00
IUUC-Bra-017962	Brassica rapa	58.56	9.00e-87	312.00
IUUC-Dse-031323	Dothistroma septosporum	45.45	5.00e-16	79.30
IUUC-Gma-044224	Glycine max	60.82	1.00e-85	308.00
IUUC-Hvu-047275	Hordeum vulgare	74.74	5.00e-117	412.00
IUUC-Lpe-051512	Leersia perrieri	79.30	6.00e-116	409.00
IUUC-Lma-053234	Leptosphaeria maculans	55.17	1.00e-14	74.70
IUUC-Mtr-058288	Medicago truncatula	59.18	2.00e-89	321.00
IUUC-Mac-065671	Musa acuminata	65.38	2.00e-101	361.00
IUUC-Mlu-067754	Myotis lucifugus	29.21	1.00e-27	115.00
IUUC-Obr-076822	Oryza brachyantha	80.28	3.00e-128	450.00
IUUC-Ogl-077432	Oryza glaberrima	80.28	2.00e-128	451.00
IUUC-Osa-085802	Oryza sativa	80.28	2.00e-128	451.00
IUUC-Olu-087851	Ostreococcus lucimarinus	58.49	4.00e-17	80.90
IUUC-Ppa-096009	Physcomitrella patens	50.68	2.00e-72	265.00
IUUC-Pop-099544	Populus trichocarpa	56.90	5.00e-82	296.00
IUUC-Ppe-101698	Prunus persica	55.67	2.00e-75	274.00
IUUC-Pyt-104787	Pyrenophora triticirepentis	55.17	1.00e-14	74.70
IUUC-Smo-108678	Selaginella moellendorffii	54.58	3.00e-78	284.00
IUUC-Sit-110189	Setaria italica	85.51	8.00e-132	462.00
IUUC-Sly-111209	Solanum lycopersicum	61.81	8.00e-85	305.00
IUUC-Stu-112762	Solanum tuberosum	61.81	1.00e-84	305.00
IUUC-Sbi-114379	Sorghum bicolor	87.28	3.00e-137	479.00
IUUC-Tca-121271	Theobroma cacao	60.34	1.00e-84	305.00
IUUC-Tae-122798	Triticum aestivum	75.09	7.00e-117	412.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence