iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131755

Ensembl Protein ID

ENSXETP00000043934.3

UniProt Accession

F6SMX8; F6SMX8_XENTR

Genbank Protein ID

ENSXETP00000043934

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01087157

Gene Name

wdr78

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020368.3	ENSXETT00000043934.3	ENSXETP00000043934.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-10	38.6	534	576

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.........sd..tllvsGsdDgtikvWDlrtg 33
           Ht++v+ l++         +d   +lvs + Dg i  W +r+g
   Q: 534  HTSPVWQLKWiehdrgnlgDDkgEILVSVCADGRITRWHIRKG 576
           ************99999985566779**********9998877 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSGPTATEGK AKKLNSVVTI KCCLYCKARN SALVMQRVGQ SRPIATGVAL NRAYRGTAAT 60
KSLARGRNDR QGDIWLSTTE QKNVQILDDD GKDVSPQPLF QAEPGTVPQK QSKLFTPPDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGGCC CCACAGCTAC TGAGGGGAAA GCGAAAAAGC TGAATTCAGT TGTCACAATG 60
TAAGCACAAA CGTTTTGTAT TGCTTAAATA ATGCGGCTAA CTGTGTCTGA TTTGTGTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	54.23	0.00e+00	720.00
IUUC-Apl-004037	Anas platyrhynchos	49.93	0.00e+00	714.00
IUUC-Aca-004686	Anolis carolinensis	49.81	0.00e+00	756.00
IUUC-Ame-010641	Astyanax mexicanus	48.74	0.00e+00	655.00
IUUC-Bta-012779	Bos taurus	54.93	0.00e+00	755.00
IUUC-Cja-019217	Callithrix jacchus	55.22	0.00e+00	752.00
IUUC-Cfa-020613	Canis familiaris	54.18	0.00e+00	727.00
IUUC-Cpo-022374	Cavia porcellus	52.57	0.00e+00	748.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	43.87	2.00e-80	293.00
IUUC-Csa-023471	Chlorocebus sabaeus	54.10	0.00e+00	737.00
IUUC-Cho-024485	Choloepus hoffmanni	47.81	2.00e-175	609.00
IUUC-Cin-025295	Ciona intestinalis	46.53	0.00e+00	630.00
IUUC-Csv-025888	Ciona savignyi	48.25	0.00e+00	645.00
IUUC-Dre-027657	Danio rerio	47.18	0.00e+00	706.00
IUUC-Dno-029422	Dasypus novemcinctus	68.32	1.00e-153	536.00
IUUC-Dor-030738	Dipodomys ordii	32.77	3.00e-62	233.00
IUUC-Dme-032178	Drosophila melanogaster	30.28	2.00e-49	191.00
IUUC-Ete-032340	Echinops telfairi	50.45	5.00e-83	302.00
IUUC-Eca-033418	Equus caballus	55.15	0.00e+00	721.00
IUUC-Eeu-035088	Erinaceus europaeus	45.61	1.00e-89	324.00
IUUC-Fca-035471	Felis catus	54.12	0.00e+00	711.00
IUUC-Fal-036908	Ficedula albicollis	42.55	1.00e-153	536.00
IUUC-Gmo-038672	Gadus morhua	42.07	1.00e-87	317.00
IUUC-Gga-040422	Gallus gallus	49.21	0.00e+00	694.00
IUUC-Gac-042448	Gasterosteus aculeatus	41.66	2.00e-152	533.00
IUUC-Ggo-045567	Gorilla gorilla	51.89	0.00e+00	709.00
IUUC-Hsa-046857	Homo sapiens	53.71	0.00e+00	747.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	62.13	8.00e-169	586.00
IUUC-Lch-050496	Latimeria chalumnae	55.79	0.00e+00	846.00
IUUC-Loc-052759	Lepisosteus oculatus	58.33	0.00e+00	817.00
IUUC-Laf-053515	Loxodonta africana	54.99	0.00e+00	764.00
IUUC-Mcc-054741	Macaca mulatta	53.58	0.00e+00	749.00
IUUC-Meu-056698	Macropus eugenii	68.44	2.00e-118	419.00
IUUC-Mga-059689	Meleagris gallopavo	49.59	0.00e+00	688.00
IUUC-Mmr-061641	Microcebus murinus	52.85	1.00e-164	572.00
IUUC-Mdo-061968	Monodelphis domestica	50.00	0.00e+00	748.00
IUUC-Mmu-063908	Mus musculus	54.01	0.00e+00	719.00
IUUC-Mpu-065957	Mustela putorius furo	55.22	0.00e+00	711.00
IUUC-Mlu-067454	Myotis lucifugus	54.98	0.00e+00	745.00
IUUC-Nle-069312	Nomascus leucogenys	55.62	0.00e+00	762.00
IUUC-Opr-070363	Ochotona princeps	44.98	8.00e-175	607.00
IUUC-Ont-072322	Oreochromis niloticus	40.93	9.00e-152	530.00
IUUC-Oan-073666	Ornithorhynchus anatinus	52.59	0.00e+00	748.00
IUUC-Ocu-074719	Oryctolagus cuniculus	55.36	0.00e+00	788.00
IUUC-Ola-087351	Oryzias latipes	46.43	1.00e-80	292.00
IUUC-Olu-087835	Ostreococcus lucimarinus	28.28	3.00e-43	169.00
IUUC-Oga-088476	Otolemur garnettii	56.21	0.00e+00	764.00
IUUC-Oar-089261	Ovis aries	54.82	0.00e+00	718.00
IUUC-Ptr-091329	Pan troglodytes	34.90	5.00e-63	235.00
IUUC-Pan-091774	Papio anubis	53.57	0.00e+00	747.00
IUUC-Psi-093526	Pelodiscus sinensis	69.81	3.00e-162	565.00
IUUC-Pma-094755	Petromyzon marinus	49.80	2.00e-71	261.00
IUUC-Ppa-095355	Physcomitrella patens	42.19	9.00e-41	160.00
IUUC-Pfo-096510	Poecilia formosa	38.35	9.00e-134	470.00
IUUC-Pab-098218	Pongo abelii	54.62	0.00e+00	749.00
IUUC-Pca-100350	Procavia capensis	30.66	6.00e-55	208.00
IUUC-Pva-102551	Pteropus vampyrus	63.51	5.00e-135	474.00
IUUC-Rno-105674	Rattus norvegicus	54.19	0.00e+00	750.00
IUUC-Sha-107552	Sarcophilus harrisii	52.67	0.00e+00	731.00
IUUC-Smo-109353	Selaginella moellendorffii	42.35	3.00e-69	254.00
IUUC-Sar-113136	Sorex araneus	56.76	8.00e-171	593.00
IUUC-Ssc-116203	Sus scrofa	56.62	0.00e+00	690.00
IUUC-Tgu-117141	Taeniopygia guttata	46.49	3.00e-155	541.00
IUUC-Tru-118061	Takifugu rubripes	32.54	1.00e-54	207.00
IUUC-Tni-119670	Tetraodon nigroviridis	35.38	8.00e-106	377.00
IUUC-Tbe-127913	Tupaia belangeri	48.85	3.00e-163	568.00
IUUC-Ttr-128515	Tursiops truncatus	52.92	0.00e+00	646.00
IUUC-Vpa-130560	Vicugna pacos	60.11	6.00e-128	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence