iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121357

Ensembl Protein ID

EOY17763

UniProt Accession

A0A061FLJ0; A0A061FLJ0_THECC

Genbank Protein ID

EOY17763.1; EOY17764.1

Protein Name

Alfin-like 1 isoform 1

Genbank Nucleotide ID

CM001888; CM001888

Gene Name

TCM_042491

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042491	EOY17763	EOY17763

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.20e-08	35.9	183	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C  Cg g+++++  + C+ C++w+H +C+k++   + ++ + + Cp+C++
   Q: 183  TFCGSCGGGYNSDEFWIGCDMCERWYHGKCVKIT-PAKAETIKFYKCPSCQK 233
           79********************************.888888877******87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASSSPCTVE EIFKDYSARR SALVRALTYD VDDFYSQCDP DKENLCLYGH PNESWEVALP 60
AEEVPPELPE PALGINFARD GMNRKDWLSL VAVHSDCWLL SIAFYFGARL NRNERKRLFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAACCAAA CCGACAAATC TCCTTTCCCT TCTTCCTTTT ATCGTCTGTG TTTTGTCTGT 60
TTCGGGACAC CCTGAGCTTC ATAAACTCTT TGTTTTGTAT TTGGAAACCA TCGATTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024758	Choloepus hoffmanni	51.11	4.00e-10	61.20
IUUC-Cin-025225	Ciona intestinalis	42.11	9.00e-11	61.60
IUUC-Olu-087829	Ostreococcus lucimarinus	61.87	8.00e-42	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence