iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113909

UUCD1 version

UUC-SoB-00454

Ensembl Protein ID

Sb03g044490.1

UniProt Accession

C5XGY8; C5XGY8_SORBI

Genbank Protein ID

EES02001.1; KXG34026.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762; CM000762

Gene Name

SORBI_003G410400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g044490	Sb03g044490.1	Sb03g044490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-06	30.0	179	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ +++ C H+fh+ C++ w        ++++CP+C
   Q: 179  CPTCLEEYtpDNPKIITKCCHHFHLGCIYEW------MERSDTCPIC 219
           ******999877556799*************......********** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGGFCCCLST EDFEEYVYPN NPIYRQCISL RHFFHSIFGG YTATFQRLES RPNNPAQGVT 60
PPGSTNPSVN INDNSLAETY HLVSRPPPYD TDPRYARVQR EGLVSRREKS INLAQEESLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGGGT TCTGCTGCTG CCTCAGTACT GAAGATTTTG AGGAATATGT CTATCCAAAC 60
AACCCTATCT ATAGGCAATG CATATCCTTG AGGCATTTTT TCCACAGCAT TTTTGGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g044490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003101	Amborella trichopoda	53.57	8.00e-60	222.00
IUUC-Bdi-014305	Brachypodium distachyon	84.28	2.00e-116	410.00
IUUC-Bra-017888	Brassica rapa	41.52	5.00e-42	163.00
IUUC-Cre-022854	Chlamydomonas reinhardtii	62.96	5.00e-18	81.30
IUUC-Gma-043590	Glycine max	48.05	8.00e-54	202.00
IUUC-Hvu-047238	Hordeum vulgare	82.97	4.00e-116	409.00
IUUC-Lpe-050881	Leersia perrieri	85.49	1.00e-96	345.00
IUUC-Mtr-058320	Medicago truncatula	46.52	6.00e-53	199.00
IUUC-Mac-065567	Musa acuminata	63.04	8.00e-83	298.00
IUUC-Oba-075350	Oryza barthii	88.02	1.00e-99	354.00
IUUC-Obr-076662	Oryza brachyantha	85.59	2.00e-111	394.00
IUUC-Ogl-076952	Oryza glaberrima	86.46	2.00e-118	417.00
IUUC-Ogu-078019	Oryza glumaepatula	88.02	1.00e-99	354.00
IUUC-Oin-079155	Oryza indica	86.46	2.00e-118	417.00
IUUC-Olo-080258	Oryza longistaminata	86.98	2.00e-99	353.00
IUUC-Ome-081642	Oryza meridionalis	86.43	4.00e-114	402.00
IUUC-Oni-082523	Oryza nivara	87.50	3.00e-99	353.00
IUUC-Opu-083941	Oryza punctata	87.30	1.00e-96	344.00
IUUC-Oru-084804	Oryza rufipogon	88.02	8.00e-100	355.00
IUUC-Osa-085985	Oryza sativa	86.46	2.00e-118	417.00
IUUC-Olu-087706	Ostreococcus lucimarinus	53.12	3.00e-14	70.50
IUUC-Ppa-095246	Physcomitrella patens	37.76	4.00e-34	137.00
IUUC-Pop-099886	Populus trichocarpa	56.28	1.00e-70	258.00
IUUC-Ppe-101954	Prunus persica	54.31	4.00e-69	253.00
IUUC-Smo-109167	Selaginella moellendorffii	68.75	2.00e-17	79.00
IUUC-Sit-109989	Setaria italica	91.27	1.00e-125	440.00
IUUC-Stu-112362	Solanum tuberosum	78.69	6.00e-27	113.00
IUUC-Tca-120961	Theobroma cacao	56.71	1.00e-73	268.00
IUUC-Tae-124969	Triticum aestivum	82.53	1.00e-115	407.00
IUUC-Tur-126641	Triticum urartu	81.48	2.00e-91	327.00
IUUC-Vvi-131562	Vitis vinifera	56.47	2.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence