iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121372

Ensembl Protein ID

EOY24788

UniProt Accession

A0A061G5W7; A0A061G5W7_THECC

Genbank Protein ID

EOY24788.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001881

Gene Name

TCM_016290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_016290	EOY24788	EOY24788

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-09	36.6	161	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle++  +++ +++ C H+fh+ C+  w        ++++CP+C+
   Q: 161  CPTCLEEYdaENPKIITKCEHHFHLACILEW------MERSDTCPVCD 202
           *******96555455699*************......**********5 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGGCCCCSSK GVEISSAPGY YYYPRASDER VPLSSHSGAA SALSTGLLVD TNLEVSVPDA 60
YRPPPAPMPF DAVLGPSQNP SVAQGIHNSK SDEAVQTTHV DSGQETVGVD TRETSIKSED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTTGAATC TCGAAATCAT ATCCAATCGA AGTTTCAATC AACAGGTAAT TTCATATCTT 60
TTCTCAACTT TTTTTTTTTA ATTTTGGGAA TTTAGCTCGC TATATATTGA TTGAATTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000389	Aegilops tauschii	45.95	7.00e-36	142.00
IUUC-Atr-002805	Amborella trichopoda	52.63	4.00e-42	163.00
IUUC-Aly-005682	Arabidopsis lyrata	50.73	1.00e-41	161.00
IUUC-Ath-006898	Arabidopsis thaliana	47.71	1.00e-43	168.00
IUUC-Bci-013799	Botrytis cinerea	37.21	3.00e-06	45.40
IUUC-Bdi-014710	Brachypodium distachyon	44.76	2.00e-40	157.00
IUUC-Bol-015746	Brassica oleracea	43.50	1.00e-36	145.00
IUUC-Bra-017455	Brassica rapa	46.12	2.00e-42	164.00
IUUC-Gma-044261	Glycine max	58.82	2.00e-60	224.00
IUUC-Hvu-047682	Hordeum vulgare	43.35	3.00e-39	153.00
IUUC-Mtr-057775	Medicago truncatula	57.14	2.00e-47	181.00
IUUC-Mac-065486	Musa acuminata	51.67	2.00e-51	194.00
IUUC-Oba-075793	Oryza barthii	43.46	4.00e-35	140.00
IUUC-Obr-076796	Oryza brachyantha	43.81	4.00e-42	162.00
IUUC-Ogl-077552	Oryza glaberrima	42.86	7.00e-36	142.00
IUUC-Ogu-078163	Oryza glumaepatula	43.46	4.00e-35	140.00
IUUC-Oin-079978	Oryza indica	42.86	7.00e-36	142.00
IUUC-Ome-081206	Oryza meridionalis	42.35	2.00e-35	140.00
IUUC-Oni-082498	Oryza nivara	43.46	4.00e-35	140.00
IUUC-Oru-084462	Oryza rufipogon	43.46	4.00e-35	140.00
IUUC-Osa-085799	Oryza sativa	42.86	7.00e-36	142.00
IUUC-Olu-087706	Ostreococcus lucimarinus	58.33	3.00e-17	80.10
IUUC-Pop-099032	Populus trichocarpa	65.93	1.00e-50	191.00
IUUC-Ppe-101765	Prunus persica	69.67	2.00e-64	238.00
IUUC-Sit-110001	Setaria italica	43.27	8.00e-40	155.00
IUUC-Sly-111149	Solanum lycopersicum	46.73	8.00e-40	155.00
IUUC-Stu-111977	Solanum tuberosum	48.33	1.00e-40	158.00
IUUC-Sbi-114500	Sorghum bicolor	43.27	4.00e-41	159.00
IUUC-Tae-124908	Triticum aestivum	43.75	2.00e-41	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence