iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099325

Ensembl Protein ID

POPTR_0018s09840.1

UniProt Accession

B9ILX4; B9ILX4_POPTR

Genbank Protein ID

EEF03032.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_578583; POPTR_0018s09840g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s09840	POPTR_0018s09840.1	POPTR_0018s09840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-13	50.4	541	565

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sdtllvsGsdDgtikvWD 29
           +t+  f sd+ +++ +   +i +WD
   Q: 541  MTAATFsSDGSVLAVAAETVITLWD 565
           6777898888899999999****** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIRGGRNYVS SPPAFSNDAK RLLVCAANSV SIFSTATGLP VASLDGHRAL VTAVIVVPAS 60
TPASKILCYC WTASLDGTIR YWDFSVPELI KIINVNSPII SMVIPSLLCQ TTENNEKSLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGGTTTT ATGGTTTTAG GAGCTCGCCG CTATTAGTGC TCTTGCAAGA CTTCACTCAC 60
TGTCTTCAAT TTCAAACCCC CGCCCCTCTC TCTCATATCA TCAAAGTCTA AAGATGATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

pop:POPTR_0018s09840g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004225	Anas platyrhynchos	25.83	3.00e-34	139.00
IUUC-Aly-005971	Arabidopsis lyrata	63.58	0.00e+00	1037.00
IUUC-Ath-007216	Arabidopsis thaliana	63.22	0.00e+00	1036.00
IUUC-Ani-009273	Aspergillus nidulans	25.31	2.00e-14	73.90
IUUC-Ate-010477	Aspergillus terreus	25.81	3.00e-19	90.10
IUUC-Bol-015950	Brassica oleracea	62.15	0.00e+00	1007.00
IUUC-Bra-016891	Brassica rapa	62.64	0.00e+00	1017.00
IUUC-Cre-022871	Chlamydomonas reinhardtii	34.65	6.00e-10	55.80
IUUC-Cho-025070	Choloepus hoffmanni	25.75	6.00e-42	165.00
IUUC-Cgl-026473	Colletotrichum gloeosporioides	35.48	1.00e-11	65.10
IUUC-Dor-030476	Dipodomys ordii	25.75	6.00e-24	105.00
IUUC-Dse-031561	Dothistroma septosporum	41.57	2.00e-16	81.30
IUUC-Fox-037801	Fusarium oxysporum	37.11	6.00e-13	69.30
IUUC-Ggr-040067	Gaeumannomyces graminis	23.42	3.00e-12	67.40
IUUC-Gga-040173	Gallus gallus	26.78	3.00e-28	118.00
IUUC-Meu-056448	Macropus eugenii	29.76	2.00e-19	90.10
IUUC-Mpo-057552	Magnaporthe poae	36.36	1.00e-11	64.70
IUUC-Mvi-060387	Microbotryum violaceum	26.91	1.00e-31	131.00
IUUC-Mpu-066642	Mustela putorius furo	27.36	2.00e-40	160.00
IUUC-Oan-073397	Ornithorhynchus anatinus	23.65	8.00e-14	70.50
IUUC-Ocu-074934	Oryctolagus cuniculus	26.07	4.00e-46	179.00
IUUC-Olu-087737	Ostreococcus lucimarinus	26.30	5.00e-56	212.00
IUUC-Ppa-095363	Physcomitrella patens	36.21	1.00e-133	470.00
IUUC-Pte-104266	Pyrenophora teres	25.65	1.00e-15	78.60
IUUC-Pyt-104657	Pyrenophora triticirepentis	25.61	3.00e-18	87.40
IUUC-Sja-107756	Schizosaccharomyces japonicus	25.33	2.00e-11	63.50
IUUC-Spo-108237	Schizosaccharomyces pombe	23.18	7.00e-16	79.00
IUUC-Smo-108802	Selaginella moellendorffii	34.55	5.00e-125	441.00
IUUC-Sar-113336	Sorex araneus	34.31	7.00e-10	58.90
IUUC-Tvi-122323	Trichoderma virens	22.98	1.00e-12	68.20
IUUC-Tme-127167	Tuber melanosporum	22.62	3.00e-16	80.50
IUUC-Vda-129794	Verticillium dahliae	22.37	8.00e-09	55.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence