iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114028

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G227400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g027560	Sb05g027560.1	Sb05g027560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.0	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl ++ dg  ++vlp C H+fha C++ w       +++++CPlCr
   Q: 129  CGVCLAELADGeaLRVLPaCMHFFHAACVNEW------LQGHDTCPLCR 171
           99******66666999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATTTNNAGG GGASKNHLSS SSLQDGSAYG QAYYSQNSGE PPGDANDNVM PIVFVGITVV 60
LVLLRLLCCR IYKEQVAGVG GDRVGQPPSC RAGGLADTDG PSTVAAVEVV PPLVCTYRKE 120

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Nucleotide Sequence
(Fasta)

ATGGCCACAA CCACGAACAA TGCCGGCGGC GGCGGTGCAA GCAAGAACCA CCTGTCGTCG 60
TCATCGTTGC AGGACGGCAG TGCGTACGGC CAGGCGTACT ACAGCCAGAA TTCCGGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_05g027560

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence