iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112473

Ensembl Protein ID

PGSC0003DMT400089191

UniProt Accession

M1DHM6; M1DHM6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400038762	PGSC0003DMT400089191	PGSC0003DMT400089191

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-06	29.0	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  ++ lp C Hvfh  C+  w       + + +CPlCr
   Q: 106  CAVCLGEFQEGewLKHLPyCSHVFHVACIDTW------FQIHSSCPLCR 148
           ********88777566778*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSPDSTPGI GPLHWDPLLI VSVGIVCFIF LLFSYFKIIQ TRCCGFLSVH FYRNPIQRHQ 60
LNDHILEDHD SQLQSRGLDS YIMHSLPITQ FKKNDEQTTR PNNSDCAVCL GEFQEGEWLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTAGTC CAGACTCCAC TCCAGGCATT GGACCTTTGC ATTGGGATCC GCTACTGATT 60
GTCTCAGTAG GGATAGTTTG TTTTATCTTT CTGCTATTCA GTTACTTCAA GATTATACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102594960

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002876	Amborella trichopoda	37.50	1.00e-25	108.00
IUUC-Gma-043983	Glycine max	40.70	8.00e-34	135.00
IUUC-Mtr-058316	Medicago truncatula	52.59	9.00e-24	102.00
IUUC-Olu-087781	Ostreococcus lucimarinus	34.74	1.00e-12	65.10
IUUC-Pop-098811	Populus trichocarpa	51.69	6.00e-33	130.00
IUUC-Ppe-101262	Prunus persica	61.36	2.00e-28	116.00
IUUC-Sly-111098	Solanum lycopersicum	90.86	7.00e-104	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence