iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099426

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_753594; POPTR_0001s45630g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s45630	POPTR_0001s45630.1	POPTR_0001s45630.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	35.59	4.00e-04	40.80	IUUC-Sce-106294
UBD/Alpha-Helix/UIM	35.59	4.00e-04	40.80	IUUC-Sce-106294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MERPICHLQS MNGELLTDIM SRVDGPALAS VASTCSELRG IARDQSLWKK LCHSRWPSTA 60
LEEAEHLISG SVHGCFDKFY SDACPLVLYD EVANANSLKV LECAELNPRT SPSDLLSLID 120

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Nucleotide Sequence
(Fasta)

ATGGAGCGTC CGATATGTCA TCTCCAGAGC ATGAATGGTG AACTGCTAAC CGATATCATG 60
TCTCGTGTAG ATGGCCCAGC CCTCGCTTCG GTAGCTAGTA CATGTTCTGA GCTCCGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

KEGG

pop:POPTR_0001s45630g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015059	Brachypodium distachyon	23.74	9.00e-09	53.90
IUUC-Cne-027089	Cryptococcus neoformans	46.15	2.80e+00	26.60
IUUC-Hvu-047576	Hordeum vulgare	24.15	2.00e-21	95.50
IUUC-Loc-051732	Lepisosteus oculatus	45.28	2.00e-05	42.70
IUUC-Obr-076772	Oryza brachyantha	35.29	6.00e-09	51.60
IUUC-Ogu-078178	Oryza glumaepatula	23.93	8.00e-18	84.00
IUUC-Oin-079543	Oryza indica	23.62	1.00e-17	83.20
IUUC-Oni-082751	Oryza nivara	23.62	1.00e-17	83.20
IUUC-Opu-083767	Oryza punctata	24.89	2.00e-12	65.90
IUUC-Oru-084545	Oryza rufipogon	23.62	1.00e-17	83.20
IUUC-Osa-085485	Oryza sativa	23.62	1.00e-17	83.20
IUUC-Ola-087193	Oryzias latipes	40.35	8.00e-05	40.80
IUUC-Olu-087743	Ostreococcus lucimarinus	52.63	9.70e-01	28.10
IUUC-Sce-106294	Saccharomyces cerevisiae	35.59	1.00e-04	40.80
IUUC-Sit-109946	Setaria italica	25.20	7.00e-19	87.40
IUUC-Sbi-114248	Sorghum bicolor	24.85	5.00e-05	41.20
IUUC-Tae-123934	Triticum aestivum	24.03	4.00e-10	58.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence