iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111363

Ensembl Protein ID

Solyc12g056400.1.1

UniProt Accession

K4DFX1; K4DFX1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g056400.1	Solyc12g056400.1.1	Solyc12g056400.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-09	37.4	300	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh  C+ kw       + +++CPlC+
   Q: 300  CSICLSTYDDGdeLRELPCGHLFHCPCIDKW------LYMSATCPLCK 341
           ********5555599****************......**********7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MFLPSPSSSP LLRSSNDGLS LFRSTNRYSV RETIRFMQRA SNRRALMMHE PSEQIDDRQS 60
NWAYSKPVVI IDLLWNFMYI IAAVVVLVLS RNEKLEMPLR VWIIGYCFLC MIHVVSVYLE 120

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Nucleotide Sequence
(Fasta)

ATGTTTTTAC CAAGTCCATC GAGTTCACCA TTATTAAGAT CAAGCAATGA CGGATTGTCT 60
CTTTTTCGAT CGACGAATCG TTACAGTGTT CGTGAAACGA TTAGATTTAT GCAAAGAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101263588

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Olu-087774	Ostreococcus lucimarinus	45.31	5.00e-13	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence