iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Mmu-063134

Ensembl Protein ID

ENSMUSP00000024121.4

UniProt Accession

A0A0R4J054; A0A0R4J054_MOUSE

Genbank Protein ID

EDL40272.1

Protein Name

RIKEN cDNA 4921501E09; RIKEN cDNA 4921501E09 gene

Genbank Nucleotide ID

CT033772

Gene Name

4921501E09Rik; mCG_52876

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000023350.4	ENSMUST00000024121.4	ENSMUSP00000024121.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.20e-08	35.3	6	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+++++ ++ ++eC  C++wfH  C++++ ee+  + + + Cp+C+
   Q: 6    VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIE-EENAVDIDIYHCPDCE 54
           69*.******************************.999999999******7 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MALVPVYCLC RQPYNVNHFM IECGLCQDWF HGSCVGIEEE NAVDIDIYHC PDCEAVFGPS 60
IMKNWHGSPR GHDALKRKPL MTGSPTSIHQ IQGRIFESSD KVILKPTGSH LTVEFLLESS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGATGCGAG AGGCCAGCAA CAGAGTGGTT ACAGAAGCTT CTTGAGAGGT TTCAGGTATC 60
TGTAGGAAAC ACAAGAAAGT CACCACCTGA CTTCAGGGTC AAAGTAAGTG GCCTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

mmu:74042

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058621	Medicago truncatula	38.57	8.00e-11	60.50
IUUC-Olu-087802	Ostreococcus lucimarinus	50.00	2.00e-14	72.40
IUUC-Rno-105402	Rattus norvegicus	79.38	0.00e+00	1377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence