iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021532

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02040767

Gene Name

Eml6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000003169.3	ENSCPOT00000003212.2	ENSCPOP00000002869.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-32	108.5	876	908
UBD/Beta-Prp	2.30e-72	243.7	181	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           +++++la  ++ ++++s+s+Dgt ++WDl + +
   Q: 876  GEIWGLAThPSkDIFISASNDGTARIWDLADKK 908
           4688888887779***************98765 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++gh+++ +  ++ +p  +++at s+d+t+++w+++++  +  + + +++ +++ fspdgk l+ g +D+   v + +t + +++++  
   Q: 181  VQGHMEGEVWGLAAHPLLPICATVSDDKTLRIWELSSQHRMLAVRKLKKGGRCCAFSPDGKALAVGLNDGSFLVVNADTVEDMVSFHHR 269
           689999999999****************************99999999999******************988888************** PP
   S: 94   edsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl............... 166
           ++++ +++fs+ +g++l+++shd+ + ++++ t + +  + +g ++ ++++ +++ g+ll   s  +   ++                 
   Q: 270  KEMISDIKFSKdTGKYLAVASHDNFVDIYNVLTSKRVG-ICKGASSYITHIDWDSRGKLLQVNSGAKEQLFFEAprgkrhiirpsemek 357
           ***********667***********************9.******************88877777666667888999999999998888 PP
   S: 167  .........ktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgs 241
                       ++   +   + +  +v+  s+++++  l++g++ g vkl+++    +    +++ gh++ v+ vr + nd  l++++
   Q: 358  iewdtwscvLGPTCEGIWpaHS-DVTDVNAASLTKDRSLLATGDDFGFVKLFSYPvkgQHARFKKYVGHSAHVTNVRWLHNDSVLLTVG 445
           8888888877777888888544.888999999**********************997766679**************998888777766 PP
   S: 242  .sDgsiriWdlrsg 254
            +D  + iW   ++
   Q: 446  gADTALMIW---TR 456
           6********...33 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

RGHKDKIFVV KCNPHHVDKL VTVGIKHIKF WQQAGGGFTS KRGIFGGVGK LETMMCVSYG 60
RMEDLVFSGA ATGDIFIWKD ILLLKTVKAH DGPVFAMYAL DKGFVTGGKD GIVELWDDMF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGGACATA AAGATAAAAT ATTTGTGGTA AAGTGTAACC CCCATCACGT TGACAAACTG 60
GTTACAGTTG GGATTAAGCA CATCAAATTC TGGCAACAAG CAGGTACTCT CATTTTGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-027751	Danio rerio	81.27	0.00e+00	1910.00
IUUC-Gga-040839	Gallus gallus	92.47	0.00e+00	1206.00
IUUC-Opr-070957	Ochotona princeps	97.07	0.00e+00	757.00
IUUC-Olu-087860	Ostreococcus lucimarinus	35.62	1.00e-105	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence