iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gac-042040

UUCD1 version

UUC-GaA-00583

Ensembl Protein ID

ENSGACP00000015343.1

UniProt Accession

G3PCL9; G3PCL9_GASAC

Protein Name

Uncharacterized protein

Gene Name

EML6 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000011586.1	ENSGACT00000015373.1	ENSGACP00000015343.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-48	159.5	786	824
UBD/Beta-Prp	2.70e-126	421.2	757	957

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvs.GsdDgt.ikvWDlrtgvll 36
           H+ +v++l+f  d + lvs G dDg  i vWD+++g +l
   Q: 786  HQRGVCALDFsADgKSLVSvGVDDGHsIVVWDWKRGEKL 824
           9999*******5557777735588666******999876 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkghedsvlslsfspsg.d 107
           +++a  +rd  + vwd++t k+l+ l   h+ +v a++fs dgk lv+++ D  + i vwd + g+ + t +gh++++  ++ +p   d
   Q: 757  EVCAQVGRDPAVHVWDIQTLKCLSLLrGFHQRGVCALDFSADGKSLVSVGVDdgHSIVVWDWKRGEKLATARGHKEKIFVVKCNPMLmD 845
           22333334555555555555555555333555555555555555555555554555555555555555555555555555555553335 PP
   S: 108  klvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng 192
           klv+ +  + i+ w+   g            g+ ++ ++v++  ++ l++sG++ + v +W  k + ll+t +  h+++v  +   +  
   Q: 846  KLVTVG-IKHIQFWQQAGGGLTFRrgafRGVGRPETMMSVCYGRSDALVFSGGATGDVYIW--KEALLLKTVKA-HDGPVFAMFSLD-- 928
           554444.555555543333322223543333445555555555555555555555555555..45555555554.555555554444.. PP
   S: 193  kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           k +v+g++dg v+lwd    +c++t+                                          + +
   Q: 929  KGFVTGGKDGVVELWDDMFDRCLKTY------------------------------------------AIK 957
           34555555555555555555555555..........................................444 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

MSDRSAPGCR LRLDWVYGYR GHQCRNNLYY TAGKEVVYFV AGVGVVYNTR EHSQRFYLGH 60
NDDIISLALH PERSLVPTGQ VRDPYVCVWD SFTAQSVSLL RDEHTHGIAC LAFSADGQRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGACC GGAGCGCCCC GGGCTGCCGG CTCAGACTGG ACTGGGTCTA CGGGTACCGG 60
GGCCACCAGT GCCGGAATAA CCTGTACTAC ACCGCCGGCA AGGAGGTGGT GTACTTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-025038	Choloepus hoffmanni	77.00	0.00e+00	1198.00
IUUC-Ont-071928	Oreochromis niloticus	88.50	0.00e+00	3466.00
IUUC-Ola-086943	Oryzias latipes	85.20	0.00e+00	3240.00
IUUC-Olu-087860	Ostreococcus lucimarinus	38.51	2.00e-111	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence