iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050345

Ensembl Protein ID

ENSLACP00000012102.1

UniProt Accession

H3AR31; H3AR31_LATCH

Genbank Protein ID

ENSLACP00000012102

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01121809

Gene Name

EML6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010655.1	ENSLACT00000012194.1	ENSLACP00000012102.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-39	131.4	1207	1239
UBD/Beta-Prp	5.70e-91	305.0	244	462

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           +++++la  ++ ++++s+sdDgti++WDl + +
   Q: 1207 GEIWGLAThPSkDIFISASDDGTIRIWDLADKK 1239
           4688888887779***************98765 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtl 90
           gh+++ ++ ++++p k+++atg  +rd  i +wd++t k+l+ l  +h+ +v a++fs dgk lv+ + D  +ti vwd ++g+ + t 
   Q: 244  GHDDDILS-LAIHPMKDYVATGqvGRDPAIHIWDTQTLKCLSLLkGQHQRGVCALDFSADGKGLVSIGLDdnHTIVVWDWKKGEKLATT 331
           45565555.99**********95569******************7789******************9999899**************** PP
   S: 91   kghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           +gh+d++  ++ +p   dklv+ +  + i+ w+   g   ++     + g+ ++ +cv++   ++l++sG++ + v +W  k   ll+t
   Q: 332  RGHKDKIFVVKCNPHHvDKLVTVG-MKHIKFWQQAGGGLTSKrgtfGNIGKLETMMCVSYGRIEDLIFSGAATGDVYIW--KDTLLLKT 417
           **************7769999988.99*****9888888888998878899999*************************..77999999 PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
            +  h+++v  +   +  k +v+g++dg v+lwd   ++c++t+   +
   Q: 418  AKA-HDGPVFAMYSLD--KGFVTGGKDGVVELWDEMFERCLKTYAIKR 462
           987.******999888..67*********************9997655 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

AGKHLTCKDE IKGIHWNTWT CVIGPEVSGI WPKYTDITDV NSVDANYGSA VLASGDDFGL 60
VKLFRFPSLK KGAKFRKYVG HSAHVTNVRW SHDFQWVLST GGADHSVFQW RLMPEDIVNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGGAAGC ATTTAACATG TAAAGACGAG ATAAAAGGAA TCCACTGGAA CACATGGACT 60
TGTGTGATTG GACCTGAAGT CAGTGGAATT TGGCCAAAGT ACACAGATAT TACTGATGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011319	Astyanax mexicanus	78.73	0.00e+00	2347.00
IUUC-Cho-025038	Choloepus hoffmanni	87.70	0.00e+00	1353.00
IUUC-Dre-027751	Danio rerio	82.68	0.00e+00	2228.00
IUUC-Mcc-055361	Macaca mulatta	88.02	0.00e+00	2626.00
IUUC-Olu-087860	Ostreococcus lucimarinus	39.63	2.00e-122	432.00
IUUC-Pan-092788	Papio anubis	88.08	0.00e+00	2627.00
IUUC-Pma-094424	Petromyzon marinus	72.46	6.00e-125	439.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence