iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000222

Ensembl Protein ID

EMT25162

UniProt Accession

M8CDE9; M8CDE9_AEGTA

Genbank Protein ID

EMT25162.1

Protein Name

Coatomer subunit beta'-2

Genbank Nucleotide ID

KD516031

Gene Name

F775_29922

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_29922	EMT25162	EMT25162

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-32	109.0	200	241
UBD/Beta-Prp	2.40e-63	214.8	8	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 200  GHSKGVNCVDYftgGDrPFLITGSDDQTAKVWDYQTKSCVQT 241
           8********966997789******************999986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           ++++++ + +p +++++++ ++g++ +w+++t+ +                        ++s++  e +v++ kf+ ++++ v g++D++i+v++++t + 
   Q: 8    SERVKSADLHPTEPWILSSLYSGSVCIWNYQTQIFpfmyrnedvlrfnlyisetrfttmVKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDK 108
           667899999******************************************************************************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           v ++++h+d++++++++p++ +++s s+d  i++wd+++g+   ++++gh++ v+ v+++p++ n ++s+slDrt+++W++ + +   tl g h + v+++
   Q: 109  VKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWACTHIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWSIGSPDPNFTLDG-HSKGVNCV 208
           *****************************************9989**********************************************9.******** PP
   S: 187  s..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           +     ++++l++gs+d+t k+wd+qt++cv+tl+gh  nv+ v f+p+  ++++gs+Dg++r+W +++  l +tl++  ++v++  +++ ++++++
   Q: 209  DyfTGGDRPFLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRIVI 305
           *7445566****************************************************************************9998665555553 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MRKLAQRSER VKSADLHPTE PWILSSLYSG SVCIWNYQTQ IFPFMYRNED VLRFNLYISE 60
TRFTTMVKSF EVTELPVRSA KFIARKQWVV AGADDMFIRV YNYNTMDKVK VFEAHTDYIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTACGTG TGCCTGTCTC CCGCCCTCCC GACAAATTGC TCCCTCCCCG CCCCTCCTCG 60
CCGCTTACAC GCGAATGCGA TCCGAGATCA GGCGATGGCG GGGCTGGCCG TCGCTTAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

ats:F775_29922

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015046	Brachypodium distachyon	93.87	0.00e+00	1102.00
IUUC-Cel-018387	Caenorhabditis elegans	56.79	0.00e+00	711.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	66.72	0.00e+00	837.00
IUUC-Csa-023383	Chlorocebus sabaeus	62.59	0.00e+00	785.00
IUUC-Cho-024454	Choloepus hoffmanni	60.49	0.00e+00	755.00
IUUC-Cme-027219	Cyanidioschyzon merolae	51.48	0.00e+00	634.00
IUUC-Dme-031791	Drosophila melanogaster	57.59	0.00e+00	736.00
IUUC-Ete-033166	Echinops telfairi	54.72	0.00e+00	659.00
IUUC-Hvu-047669	Hordeum vulgare	93.53	0.00e+00	719.00
IUUC-Opr-070334	Ochotona princeps	62.59	0.00e+00	785.00
IUUC-Oin-079484	Oryza indica	83.06	0.00e+00	1381.00
IUUC-Oni-082509	Oryza nivara	89.33	0.00e+00	1365.00
IUUC-Oru-085196	Oryza rufipogon	81.33	0.00e+00	1076.00
IUUC-Olu-087655	Ostreococcus lucimarinus	66.43	0.00e+00	815.00
IUUC-Pno-094785	Phaeosphaeria nodorum	42.06	3.00e-114	405.00
IUUC-Rno-105979	Rattus norvegicus	51.40	1.00e-178	619.00
IUUC-Tsy-118824	Tarsius syrichta	54.72	0.00e+00	659.00
IUUC-Tae-125385	Triticum aestivum	84.74	0.00e+00	1115.00
IUUC-Tur-126103	Triticum urartu	92.93	0.00e+00	1472.00
IUUC-Tbe-127770	Tupaia belangeri	58.84	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence