iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111566

Ensembl Protein ID

Solyc05g013880.1.1

UniProt Accession

K4BYA9; K4BYA9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g013880.1	Solyc05g013880.1.1	Solyc05g013880.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-23	80.8	340	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvW 28
           gHt  + cl    s +ll sGs D t+++W
   Q: 340  GHTKAILCL-InvS-DLLFSGSADRTVRIW 367
           89999***8.6534.9************** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKFRSWISPF SSANAAADHP IPPPKGMFPD DASNFSDLPS STASPSLVSQ ETNSLSSLQS 60
NLSLLTLPSV PSLQNLSPAT LNLAISARCV NSLNPRNAHV TFLAMHNNLL YAASSNEINV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATTCC GATCATGGAT TTCACCTTTT TCCTCCGCTA ACGCCGCCGC CGACCACCCT 60
ATTCCGCCGC CAAAAGGGAT GTTTCCCGAT GATGCAAGTA ACTTCTCCGA TTTACCCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

sly:101249728

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	50.53	1.00e-95	342.00
IUUC-Aly-006280	Arabidopsis lyrata	57.54	1.00e-114	405.00
IUUC-Ath-006951	Arabidopsis thaliana	57.54	5.00e-114	403.00
IUUC-Bol-015247	Brassica oleracea	60.00	4.00e-119	420.00
IUUC-Bra-017464	Brassica rapa	58.87	2.00e-116	411.00
IUUC-Gma-043162	Glycine max	60.29	1.00e-120	426.00
IUUC-Mtr-057789	Medicago truncatula	61.25	5.00e-123	433.00
IUUC-Mac-065257	Musa acuminata	51.05	4.00e-96	343.00
IUUC-Ogl-077746	Oryza glaberrima	41.93	7.00e-41	160.00
IUUC-Ogu-078557	Oryza glumaepatula	40.47	5.00e-41	160.00
IUUC-Oin-079061	Oryza indica	40.47	4.00e-41	161.00
IUUC-Oni-083112	Oryza nivara	40.47	5.00e-41	161.00
IUUC-Oru-084254	Oryza rufipogon	40.47	4.00e-41	161.00
IUUC-Osa-086021	Oryza sativa	40.47	3.00e-41	162.00
IUUC-Olu-087837	Ostreococcus lucimarinus	29.10	7.00e-26	110.00
IUUC-Pop-100092	Populus trichocarpa	66.67	6.00e-136	476.00
IUUC-Ppe-101598	Prunus persica	61.24	9.00e-117	412.00
IUUC-Smo-108947	Selaginella moellendorffii	41.10	2.00e-46	179.00
IUUC-Stu-112893	Solanum tuberosum	93.19	0.00e+00	723.00
IUUC-Sbi-114374	Sorghum bicolor	42.77	4.00e-51	194.00
IUUC-Tca-121847	Theobroma cacao	64.76	6.00e-130	456.00
IUUC-Tae-123809	Triticum aestivum	42.68	8.00e-55	206.00
IUUC-Vvi-130905	Vitis vinifera	58.97	4.00e-133	467.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence